Specifically-expressed experiments

Gene ID At4g18610
Gene name LSH9 (LIGHT SENSITIVE HYPOCOTYLS 9)
Functional description F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
120.599.9GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
105.099.9GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
88.499.9GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
80.899.9GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
75.799.9GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
75.499.9GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
74.999.9GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
73.699.9GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
62.499.8GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
59.499.8GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
46.599.8GSM133958Fukuda_1-3_2A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
43.399.8GSM142642MC002_ATH1_A7.2-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
38.199.8ArrayExpressE-MEXP-265-raw-cel-414617783---
37.799.7GSM142640MC002_ATH1_A6.3-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
31.199.7ArrayExpressE-ATMX-13-raw-cel-1556149903---
28.899.7GSM142656MC002_ATH1_A12.1-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
28.499.7ArrayExpressE-ATMX-13-raw-cel-1556149839---
26.599.7GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
25.199.6GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
24.999.6GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
24.599.6ArrayExpressE-ATMX-13-raw-cel-1556149935---
24.499.6GSM142628MC002_ATH1_A2.3-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
23.999.6GSM142626MC002_ATH1_A2.1-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
23.599.6GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
23.099.6GSM142627MC002_ATH1_A2.2-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
22.699.6ArrayExpressE-MEXP-265-raw-cel-414617890---
22.599.6ArrayExpressE-ATMX-13-raw-cel-1556149855---
22.099.6GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
22.099.6GSM142646MC002_ATH1_A8.3-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
21.899.6ArrayExpressE-ATMX-13-raw-cel-1556149775---
21.799.6GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown ArabidopsisLink to GEO
21.399.6ArrayExpressE-MEXP-265-raw-cel-414617695---
20.599.6GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
20.399.6GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
20.199.6GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
19.999.6GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
19.399.6ArrayExpressE-ATMX-13-raw-cel-1556149823---
18.999.5GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
18.699.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.699.5GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
17.999.5GSM133132S1500_0H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
16.999.5GSM142638MC002_ATH1_A6.1-dubos-5kc_repeatGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
16.899.5GSM142661MB002_ATH1_A1-Eland-ch1GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown ArabidopsisLink to GEO
16.399.5GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.899.5GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.899.5GSM142630MC002_ATH1_A3.2-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.899.5GSM142731CH001_ATH1_A010-Hampt-akcGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
15.899.5GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
15.299.4GSM142752MJ001_ATH1_A3-jones-rh1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
15.299.4ArrayExpressE-ATMX-13-raw-cel-1556149919---
15.199.4GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.199.4GSM131565ATGE_94_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
15.099.4GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
14.999.4GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
14.999.4GSM131572ATGE_98_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
14.399.4GSM27365lec1-1 RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
14.299.4GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
14.299.4GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
14.199.4GSM142657MC002_ATH1_A12.2-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.899.4ArrayExpressE-MEXP-828-raw-cel-1156922296---
13.899.4GSM142658MC002_ATH1_A12.3-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.899.4GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
13.599.4GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.299.4GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.099.4GSM133136S1500_24H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.999.3GSM133124S0_24H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.999.3GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
12.899.3GSM75511Col-0 6h MOCK replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
12.799.3GSM142650MC002_ATH1_A10.1-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
12.599.3GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
12.499.3GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.399.3GSM133141S1500_8H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
12.199.3GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
12.199.3GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
12.199.3GSM133126S0_2H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.999.3GSM131558ATGE_9_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.899.3GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.899.3GSM157330Coates_1-2_ara1OX_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
11.699.3GSM131561ATGE_93_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.699.3GSM131570ATGE_98_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.699.3GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.699.3ArrayExpressE-ATMX-13-raw-cel-1556149887---
11.699.3GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.699.3GSM133135S1500_24H_AGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.499.3GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
11.499.3GSM131567ATGE_95_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.399.3GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.299.2GSM133138S1500_2H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
11.099.2GSM157329Coates_1-1_Col-0_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.999.2GSM157332Coates_1-4_ara1/2mut_Rep1_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
10.899.2GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.799.2GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.799.2GSM142733CH001_ATH1_A012-Hampt-c1cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.799.2GSM142652MC002_ATH1_A10.3-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.699.2GSM142727CH001_ATH1_A006-Hampt-akbGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.Link to GEO
10.699.2ArrayExpressE-MEXP-722-raw-cel-1062243183---
10.699.2GSM131564ATGE_94_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.699.2GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
10.299.2ArrayExpressE-MEXP-828-raw-cel-1156922485---
10.299.2GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.299.2GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.199.2GSM131571ATGE_98_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.199.2GSM133122S0_12H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
10.199.2GSM142651MC002_ATH1_A10.2-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.199.2ArrayExpressE-MEXP-722-raw-cel-1062242948---
9.999.1GSM131559ATGE_9_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.999.1GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
9.999.1ArrayExpressE-ATMX-13-raw-cel-1556149807---
9.699.1GSM133718Urwin_A-2-Urwin-Inf_SLDGSE5724Plant gene expression associated with susceptibility to nematodesLink to GEO
9.599.1GSM157334Coates_1-6_ara1OX_Rep2_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
9.599.1ArrayExpressE-MEXP-722-raw-cel-1062243314---
9.499.1GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
9.499.1GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
9.399.1GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.399.1ArrayExpressE-MEXP-722-raw-cel-1062243048---
9.399.1GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.299.1GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
9.299.1GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
9.199.1ArrayExpressE-MEXP-722-raw-cel-1062243429---
9.199.1ArrayExpressE-ATMX-13-raw-cel-1556149791---
9.099.1GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.999.0GSM142907WW002_ATH1_A2-willa-ISOX-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
8.999.0GSM157340Coates_1-12_ara1/2mut_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in ArabidopsisLink to GEO
8.899.0GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
8.899.0GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
8.899.0GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
8.899.0GSM133128S0_4H_BGSE5688AtGenExpress: Response to sulfate limitationLink to GEO
8.899.0GSM131568ATGE_95_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
8.699.0GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
8.699.0GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage