Specifically-expressed experiments

Gene ID At4g17490
Gene name ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)
Functional description Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
256.1100.0GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
243.8100.0GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
217.3100.0GSM266666Arabidopsis, root cells, columella root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
193.0100.0GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
161.599.9GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
144.999.9GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
139.099.9GSM184892Arabidopsis, root cells, columella root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
118.399.9GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
107.599.9GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
101.099.9GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
90.199.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
87.999.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
87.599.9GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
80.899.9GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
75.699.9GSM265414Arabidopsis, root cells, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
57.299.8GSM184635Arabidopsis, root cells, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
53.799.8GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
48.999.8GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
48.199.8GSM184502Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
47.899.8GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
47.699.8GSM184492Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
46.499.8GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
45.099.8GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
43.299.8ArrayExpressE-MEXP-807-raw-cel-1173273144---
42.299.8ArrayExpressE-MEXP-807-raw-cel-1173273252---
42.199.8ArrayExpressE-MEXP-807-raw-cel-1173273170---
42.099.8GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
40.699.8GSM184634Arabidopsis, root cells, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
39.499.8GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
37.499.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
37.299.7GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
35.999.7GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
35.099.7GSM184499Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
34.199.7GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
32.799.7GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
32.499.7GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
32.399.7GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
28.999.7GSM184491Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.899.7GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
28.299.7GSM48123Col_8mer2GSE2538Chitin Oligomer ExperimentLink to GEO
27.999.7GSM184915Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
27.699.7GSM218586Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
27.599.7GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
27.099.7ArrayExpressE-MEXP-807-raw-cel-1173273060---
26.399.7GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
25.399.6GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.699.6GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.199.6GSM265416Arabidopsis, root cells, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
23.399.6GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
23.399.6GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
22.299.6GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
21.799.6GSM48122Col_8mer1GSE2538Chitin Oligomer ExperimentLink to GEO
21.199.6GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
20.999.6GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
20.999.6GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
20.399.6GSM184501Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.299.6GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
19.999.6GSM25867A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
19.999.6GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
19.799.6GSM184486Epidermis&Cortex root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.499.6GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
19.499.6GSM184505Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.499.6GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.299.6GSM184498Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.099.5GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
19.099.5ArrayExpressE-MEXP-807-raw-cel-1173273223---
18.999.5GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.999.5GSM184482Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.699.5ArrayExpressE-MEXP-807-raw-cel-1173273196---
17.599.5GSM184527Stele root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.399.5GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
16.299.5GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
15.999.5ArrayExpressE-NASC-76-raw-cel-1359879132---
15.999.5GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.499.5GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
15.399.4GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.199.4GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.899.4GSM184916Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.899.4GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.699.4ArrayExpressE-MEXP-807-raw-cel-1173273116---
14.599.4GSM184899Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.299.4GSM184507Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.199.4GSM184500Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.599.4GSM184524Stele root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.599.4GSM206276Wild type, chitooctaose treatment, biological rep3GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
13.599.4ArrayExpressE-MEXP-807-raw-cel-1173273088---
13.499.4ArrayExpressE-ATMX-28-raw-cel-1441104826---
12.999.3GSM184898Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.599.3GSM266663Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
12.499.3GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.299.3GSM184494Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.899.3GSM184528Stele root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.899.3GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.399.3GSM25874IAA/A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
11.099.2GSM142588JB001_ATH1_A2-2-Boyce-cdpk6-yfp-4-2GSE6147The role of Cdpk6 in developmentLink to GEO
10.999.2GSM206275Wild type, chitooctaose treatment, biological rep2GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
10.799.2GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.699.2GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.499.2GSM25868A treated - 3GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
10.499.2GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.499.2GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.499.2GSM25873IAA/A Treated - 1GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
10.199.2GSM184920Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.099.2GSM142587JB001_ATH1_A2-1-Boyce-cdpk6-yfp-4-1GSE6147The role of Cdpk6 in developmentLink to GEO
10.099.2GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.799.1GSM25875IAA/A Treated - 3GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
9.699.1GSM25869A Treated - 4GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
9.499.1GSM206274Wild type, chitooctaose treatment, biological rep1GSE8319A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in ArabidopsisLink to GEO
9.399.1GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.199.1ArrayExpressE-ATMX-28-raw-cel-1441104835---
9.099.1GSM184510Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.099.1GSM184485Epidermis&Cortex root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0ArrayExpressE-MEXP-711-raw-cel-1563002768---
8.899.0GSM184919Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.899.0GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.799.0GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.799.0GSM25866A Treated - 1GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
8.799.0GSM266672Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO



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