CoP: Co-expressed Biological Processes

Specifically-expressed experiments

Gene ID At4g17090

Gene name CT-BMY (CHLOROPLAST BETA-AMYLASE)

Functional description Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
87.8 99.9 GSM128794 Zarka_1-6_MT-WT24HB_Rep2_ATH1 GSE5534 Response to cold, plate grown plants
67.6 99.9 ArrayExpress E-MEXP-1345-raw-cel-1559561229 - - -
67.2 99.8 ArrayExpress E-MEXP-1345-raw-cel-1559561259 - - -
59.5 99.8 ArrayExpress E-MEXP-1345-raw-cel-1559561289 - - -
53.4 99.8 GSM131279 AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
49.3 99.8 GSM131280 AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
48.0 99.8 GSM128802 Zarka_2-6_MT-24HCB(SOIL)_Rep2_ATH1 GSE5535 Response to cold, soil grown plants
46.4 99.8 GSM131275 AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
43.5 99.8 GSM131276 AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
42.6 99.8 GSM128801 Zarka_2-5_MT-24HCA(SOIL)_Rep1_ATH1 GSE5535 Response to cold, soil grown plants
40.0 99.8 GSM133407 Bramke_A1-warre-WTC GSE5711 Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
39.2 99.8 GSM128793 Zarka_1-5_MT-WT24HA_Rep1_ATH1 GSE5534 Response to cold, plate grown plants
33.9 99.7 GSM131272 AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
33.9 99.7 GSM131271 AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
32.7 99.7 GSM133405 Bramke_A5-warre-S2C GSE5711 Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
31.5 99.7 GSM133403 Bramke_A3-warre-S6C GSE5711 Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
31.0 99.7 GSM142865 GW001_ATH1_A10-Warre-Wca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
30.8 99.7 ArrayExpress E-TABM-52-raw-cel-1583683438 - - -
30.4 99.7 GSM142867 GW001_ATH1_A12-Warre-6ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
30.4 99.7 ArrayExpress E-MEXP-1344-raw-cel-1559561653 - - -
29.7 99.7 ArrayExpress E-MEXP-1344-raw-cel-1559561713 - - -
28.8 99.7 GSM74900 Wildtype_24H Cold_Rep1 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
28.1 99.7 ArrayExpress E-MEXP-1344-raw-cel-1559561623 - - -
27.8 99.7 GSM74901 Wildtype_24H Cold_Rep2 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
27.3 99.7 GSM142866 GW001_ATH1_A11-Warre-6ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.9 99.7 GSM142864 GW001_ATH1_A9-Warre-Wca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.4 99.7 GSM142868 GW001_ATH1_A13-Warre-3ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.1 99.7 GSM265851 short 8A GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
25.6 99.7 GSM128713 Thorlby_1-2_3h-post-freeze_REP3_ATH1 GSE5524 Gene Expression During Recovery from Freezing
24.9 99.6 GSM339546 Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -8 GSE13469 Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
24.6 99.6 GSM142871 GW001_ATH1_A16-Warre-2ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
24.0 99.6 GSM142869 GW001_ATH1_A14-Warre-3ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
23.3 99.6 GSM339545 Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -7 GSE13469 Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
22.9 99.6 GSM142870 GW001_ATH1_A15-Warre-2ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
22.1 99.6 GSM265850 short 10A GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
20.3 99.6 GSM74909 ice1_24H Cold_Rep2 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
19.6 99.6 GSM269822 T6 leaf-well watered-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
19.0 99.5 GSM142878 GW001_ATH1_A23-Warre-03f GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
18.2 99.5 GSM142804 SS001_ATH1_A7-Smith-10 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
17.6 99.5 GSM142803 SS001_ATH1_A6-Smith-8-45 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
17.1 99.5 GSM74908 ice1_24H Cold_Rep1 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
16.4 99.5 GSM269824 T8 leaf-well watered-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
16.3 99.5 GSM142842 MG001_ATH1_A23-Torres-7N3 GSE6176 Impact of Type III effectors on plant defense responses
16.2 99.5 GSM74898 Wildtype_6H Cold_Rep1 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
15.8 99.5 GSM142848 MG001_ATH1_A29-Torres-9N3 GSE6176 Impact of Type III effectors on plant defense responses
15.6 99.5 ArrayExpress E-TABM-52-raw-cel-1583683662 - - -
15.4 99.5 GSM187240 Col-O_BL_B GSE7743 Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
14.9 99.4 GSM142879 GW001_ATH1_A24-Warre-03f GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.4 99.4 ArrayExpress E-MEXP-67-raw-cel-323396336 - - -
14.4 99.4 ArrayExpress E-MEXP-739-raw-cel-1099467357 - - -
14.1 99.4 GSM275638 Ler_60min GSE10876 Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
14.0 99.4 ArrayExpress E-TABM-52-raw-cel-1583683326 - - -
13.8 99.4 GSM265862 short 10B GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
13.7 99.4 GSM297382 At.StarchSD.WTSS3.SS3R1L1 GSE11708 Global gene expression in Atss3 mutant and WT over short day diurnal cycle
13.7 99.4 ArrayExpress E-TABM-52-raw-cel-1583683070 - - -
13.6 99.4 ArrayExpress E-TABM-52-raw-cel-1583683214 - - -
13.1 99.4 GSM131267 AtGen_6-1311_Cold(4°C)-Shoots-3.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
13.1 99.4 GSM74899 Wildtype_6H Cold_Rep2 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
12.3 99.3 GSM131168 AtGen_C-18_3-Pi-24_REP3_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
12.3 99.3 GSM142843 MG001_ATH1_A24-Torres-7N6 GSE6176 Impact of Type III effectors on plant defense responses
12.0 99.3 GSM131159 AtGen_C-9_3-C-24_REP3_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
12.0 99.3 GSM142815 SS002_ATH1_A7-smith-13h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
12.0 99.3 GSM265849 short 12A GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
11.7 99.3 ArrayExpress E-MEXP-546-raw-cel-863289351 - - -
11.6 99.3 GSM142847 MG001_ATH1_A28-Torres-9N1 GSE6176 Impact of Type III effectors on plant defense responses
11.6 99.3 GSM142805 SS001_ATH1_A8-Smith-11 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
11.5 99.3 GSM142831 GM001_ATH1_A30-Torres-9N6_repeat1 GSE6176 Impact of Type III effectors on plant defense responses
11.4 99.3 GSM131167 AtGen_C-17_2-Pi-24_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
11.3 99.3 GSM131110 AtGen_B-38_3-3-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.3 99.3 GSM272991 flu over-tAPX 14-2, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
11.3 99.3 GSM269833 T8 leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.2 99.2 GSM244457 Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
11.1 99.2 GSM142893 MW001_ATH1_A2-Wheel-w14 GSE6179 An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
11.0 99.2 ArrayExpress E-ATMX-32-raw-cel-1562974621 - - -
11.0 99.2 ArrayExpress E-TABM-52-raw-cel-1583683598 - - -
10.9 99.2 ArrayExpress E-TABM-21-raw-cel-529816648 - - -
10.9 99.2 ArrayExpress E-ATMX-19-raw-cel-1375547530 - - -
10.6 99.2 GSM128804 Zarka_2-8_MT-7DCB(SOIL)_Rep2_ATH1 GSE5535 Response to cold, soil grown plants
10.5 99.2 GSM272990 over-tAPX 14-2, biological rep2 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
10.5 99.2 ArrayExpress E-ATMX-32-raw-cel-1562974484 - - -
10.5 99.2 GSM128803 Zarka_2-7_MT-7DCA(SOIL)_Rep1_ATH1 GSE5535 Response to cold, soil grown plants
10.5 99.2 ArrayExpress E-MEXP-739-raw-cel-1099467348 - - -
10.4 99.2 ArrayExpress E-TABM-52-raw-cel-1583683262 - - -
10.4 99.2 GSM187239 Col-O_BL_A GSE7743 Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
10.4 99.2 ArrayExpress E-TABM-21-raw-cel-529816526 - - -
10.3 99.2 ArrayExpress E-MEXP-67-raw-cel-323396457 - - -
10.2 99.2 GSM265857 long 8A GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
10.2 99.2 ArrayExpress E-MEXP-546-raw-cel-863289298 - - -
10.1 99.2 GSM264763 Tween 0.1% 4h GSE10464 Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.1 99.2 GSM131157 AtGen_C-7_1-C-24_REP1_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
10.1 99.2 GSM269815 T6 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.1 99.2 GSM142802 SS001_ATH1_A5-Smith-5 GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
10.1 99.2 ArrayExpress E-TABM-52-raw-cel-1583683038 - - -
10.0 99.2 GSM272987 flu, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
9.9 99.1 GSM187241 Col-O_BL_C GSE7743 Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
9.9 99.1 ArrayExpress E-TABM-21-raw-cel-529816201 - - -
9.8 99.1 GSM131158 AtGen_C-8_2-C-24_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
9.8 99.1 GSM297392 At.StarchSD.WTSS3.WTR1L1 GSE11708 Global gene expression in Atss3 mutant and WT over short day diurnal cycle
9.6 99.1 ArrayExpress E-MEXP-546-raw-cel-863289246 - - -
9.5 99.1 ArrayExpress E-MEXP-1304-raw-cel-1530618893 - - -
9.5 99.1 ArrayExpress E-TABM-21-raw-cel-529816001 - - -
9.5 99.1 GSM128795 Zarka_1-7_MT-WT7DA_Rep1_ATH1 GSE5534 Response to cold, plate grown plants
9.5 99.1 ArrayExpress Evans_2-10_col-aeq-cold_ATH1 - - -
9.4 99.1 GSM131268 AtGen_6-1312_Cold(4°C)-Shoots-3.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
9.3 99.1 ArrayExpress Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1 - - -
9.3 99.1 ArrayExpress Evans_2-4_fab1-mut-cold_ATH1 - - -
9.2 99.1 GSM142841 MG001_ATH1_A22-Torres-7N1 GSE6176 Impact of Type III effectors on plant defense responses
9.1 99.1 ArrayExpress E-MEXP-546-raw-cel-863289668 - - -
9.1 99.1 ArrayExpress E-MEXP-546-raw-cel-863289607 - - -
9.0 99.1 GSM131166 AtGen_C-16_1-Pi-24_REP1_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
8.9 99.0 GSM272985 WT Col, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
8.9 99.0 GSM142816 SS002_ATH1_A8-smith-14h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
8.9 99.0 GSM131109 AtGen_B-37_3-2-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.8 99.0 GSM272989 over-tAPX 14-2, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
8.7 99.0 GSM244445 Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
8.6 99.0 GSM142813 SS002_ATH1_A5-smith-08h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
87.8	99.9	GSM128794	Zarka_1-6_MT-WT24HB_Rep2_ATH1	GSE5534	Response to cold, plate grown plants
67.6	99.9	ArrayExpress	E-MEXP-1345-raw-cel-1559561229	-	-	-
67.2	99.8	ArrayExpress	E-MEXP-1345-raw-cel-1559561259	-	-	-
59.5	99.8	ArrayExpress	E-MEXP-1345-raw-cel-1559561289	-	-	-
53.4	99.8	GSM131279	AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
49.3	99.8	GSM131280	AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
48.0	99.8	GSM128802	Zarka_2-6_MT-24HCB(SOIL)_Rep2_ATH1	GSE5535	Response to cold, soil grown plants
46.4	99.8	GSM131275	AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
43.5	99.8	GSM131276	AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
42.6	99.8	GSM128801	Zarka_2-5_MT-24HCA(SOIL)_Rep1_ATH1	GSE5535	Response to cold, soil grown plants
40.0	99.8	GSM133407	Bramke_A1-warre-WTC	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
39.2	99.8	GSM128793	Zarka_1-5_MT-WT24HA_Rep1_ATH1	GSE5534	Response to cold, plate grown plants
33.9	99.7	GSM131272	AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
33.9	99.7	GSM131271	AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
32.7	99.7	GSM133405	Bramke_A5-warre-S2C	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
31.5	99.7	GSM133403	Bramke_A3-warre-S6C	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
31.0	99.7	GSM142865	GW001_ATH1_A10-Warre-Wca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
30.8	99.7	ArrayExpress	E-TABM-52-raw-cel-1583683438	-	-	-
30.4	99.7	GSM142867	GW001_ATH1_A12-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
30.4	99.7	ArrayExpress	E-MEXP-1344-raw-cel-1559561653	-	-	-
29.7	99.7	ArrayExpress	E-MEXP-1344-raw-cel-1559561713	-	-	-
28.8	99.7	GSM74900	Wildtype_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
28.1	99.7	ArrayExpress	E-MEXP-1344-raw-cel-1559561623	-	-	-
27.8	99.7	GSM74901	Wildtype_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
27.3	99.7	GSM142866	GW001_ATH1_A11-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.9	99.7	GSM142864	GW001_ATH1_A9-Warre-Wca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.4	99.7	GSM142868	GW001_ATH1_A13-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
26.1	99.7	GSM265851	short 8A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
25.6	99.7	GSM128713	Thorlby_1-2_3h-post-freeze_REP3_ATH1	GSE5524	Gene Expression During Recovery from Freezing
24.9	99.6	GSM339546	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -8	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
24.6	99.6	GSM142871	GW001_ATH1_A16-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
24.0	99.6	GSM142869	GW001_ATH1_A14-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
23.3	99.6	GSM339545	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -7	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
22.9	99.6	GSM142870	GW001_ATH1_A15-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
22.1	99.6	GSM265850	short 10A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
20.3	99.6	GSM74909	ice1_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
19.6	99.6	GSM269822	T6 leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
19.0	99.5	GSM142878	GW001_ATH1_A23-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
18.2	99.5	GSM142804	SS001_ATH1_A7-Smith-10	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
17.6	99.5	GSM142803	SS001_ATH1_A6-Smith-8-45	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
17.1	99.5	GSM74908	ice1_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
16.4	99.5	GSM269824	T8 leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
16.3	99.5	GSM142842	MG001_ATH1_A23-Torres-7N3	GSE6176	Impact of Type III effectors on plant defense responses
16.2	99.5	GSM74898	Wildtype_6H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
15.8	99.5	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
15.6	99.5	ArrayExpress	E-TABM-52-raw-cel-1583683662	-	-	-
15.4	99.5	GSM187240	Col-O_BL_B	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
14.9	99.4	GSM142879	GW001_ATH1_A24-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.4	99.4	ArrayExpress	E-MEXP-67-raw-cel-323396336	-	-	-
14.4	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467357	-	-	-
14.1	99.4	GSM275638	Ler_60min	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
14.0	99.4	ArrayExpress	E-TABM-52-raw-cel-1583683326	-	-	-
13.8	99.4	GSM265862	short 10B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
13.7	99.4	GSM297382	At.StarchSD.WTSS3.SS3R1L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
13.7	99.4	ArrayExpress	E-TABM-52-raw-cel-1583683070	-	-	-
13.6	99.4	ArrayExpress	E-TABM-52-raw-cel-1583683214	-	-	-
13.1	99.4	GSM131267	AtGen_6-1311_Cold(4°C)-Shoots-3.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
13.1	99.4	GSM74899	Wildtype_6H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
12.3	99.3	GSM131168	AtGen_C-18_3-Pi-24_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
12.3	99.3	GSM142843	MG001_ATH1_A24-Torres-7N6	GSE6176	Impact of Type III effectors on plant defense responses
12.0	99.3	GSM131159	AtGen_C-9_3-C-24_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
12.0	99.3	GSM142815	SS002_ATH1_A7-smith-13h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
12.0	99.3	GSM265849	short 12A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
11.7	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289351	-	-	-
11.6	99.3	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
11.6	99.3	GSM142805	SS001_ATH1_A8-Smith-11	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
11.5	99.3	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
11.4	99.3	GSM131167	AtGen_C-17_2-Pi-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
11.3	99.3	GSM131110	AtGen_B-38_3-3-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.3	99.3	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
11.3	99.3	GSM269833	T8 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.2	99.2	GSM244457	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
11.1	99.2	GSM142893	MW001_ATH1_A2-Wheel-w14	GSE6179	An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.
11.0	99.2	ArrayExpress	E-ATMX-32-raw-cel-1562974621	-	-	-
11.0	99.2	ArrayExpress	E-TABM-52-raw-cel-1583683598	-	-	-
10.9	99.2	ArrayExpress	E-TABM-21-raw-cel-529816648	-	-	-
10.9	99.2	ArrayExpress	E-ATMX-19-raw-cel-1375547530	-	-	-
10.6	99.2	GSM128804	Zarka_2-8_MT-7DCB(SOIL)_Rep2_ATH1	GSE5535	Response to cold, soil grown plants
10.5	99.2	GSM272990	over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
10.5	99.2	ArrayExpress	E-ATMX-32-raw-cel-1562974484	-	-	-
10.5	99.2	GSM128803	Zarka_2-7_MT-7DCA(SOIL)_Rep1_ATH1	GSE5535	Response to cold, soil grown plants
10.5	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467348	-	-	-
10.4	99.2	ArrayExpress	E-TABM-52-raw-cel-1583683262	-	-	-
10.4	99.2	GSM187239	Col-O_BL_A	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
10.4	99.2	ArrayExpress	E-TABM-21-raw-cel-529816526	-	-	-
10.3	99.2	ArrayExpress	E-MEXP-67-raw-cel-323396457	-	-	-
10.2	99.2	GSM265857	long 8A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
10.2	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289298	-	-	-
10.1	99.2	GSM264763	Tween 0.1% 4h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.1	99.2	GSM131157	AtGen_C-7_1-C-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
10.1	99.2	GSM269815	T6 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.1	99.2	GSM142802	SS001_ATH1_A5-Smith-5	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
10.1	99.2	ArrayExpress	E-TABM-52-raw-cel-1583683038	-	-	-
10.0	99.2	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
9.9	99.1	GSM187241	Col-O_BL_C	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
9.9	99.1	ArrayExpress	E-TABM-21-raw-cel-529816201	-	-	-
9.8	99.1	GSM131158	AtGen_C-8_2-C-24_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
9.8	99.1	GSM297392	At.StarchSD.WTSS3.WTR1L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
9.6	99.1	ArrayExpress	E-MEXP-546-raw-cel-863289246	-	-	-
9.5	99.1	ArrayExpress	E-MEXP-1304-raw-cel-1530618893	-	-	-
9.5	99.1	ArrayExpress	E-TABM-21-raw-cel-529816001	-	-	-
9.5	99.1	GSM128795	Zarka_1-7_MT-WT7DA_Rep1_ATH1	GSE5534	Response to cold, plate grown plants
9.5	99.1	ArrayExpress	Evans_2-10_col-aeq-cold_ATH1	-	-	-
9.4	99.1	GSM131268	AtGen_6-1312_Cold(4°C)-Shoots-3.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.3	99.1	ArrayExpress	Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1	-	-	-
9.3	99.1	ArrayExpress	Evans_2-4_fab1-mut-cold_ATH1	-	-	-
9.2	99.1	GSM142841	MG001_ATH1_A22-Torres-7N1	GSE6176	Impact of Type III effectors on plant defense responses
9.1	99.1	ArrayExpress	E-MEXP-546-raw-cel-863289668	-	-	-
9.1	99.1	ArrayExpress	E-MEXP-546-raw-cel-863289607	-	-	-
9.0	99.1	GSM131166	AtGen_C-16_1-Pi-24_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
8.9	99.0	GSM272985	WT Col, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
8.9	99.0	GSM142816	SS002_ATH1_A8-smith-14h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
8.9	99.0	GSM131109	AtGen_B-37_3-2-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.8	99.0	GSM272989	over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
8.7	99.0	GSM244445	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
8.6	99.0	GSM142813	SS002_ATH1_A5-smith-08h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle

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Gene ID	At4g17090
Gene name	CT-BMY (CHLOROPLAST BETA-AMYLASE)
Functional description	Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).