Specifically-expressed experiments

Gene ID	At4g15210
Gene name	BAM5 (BETA-AMYLASE 5)
Functional description	cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
97.1	99.9	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
90.6	99.9	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
67.7	99.9	GSM47042	hyl1 32	GSE2473	Small RNA biogenesis mutants
66.8	99.8	GSM147966	lec1-1 Globular Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
66.6	99.8	GSM47038	hst-15 28	GSE2473	Small RNA biogenesis mutants
65.6	99.8	GSM47040	hyl1 30	GSE2473	Small RNA biogenesis mutants
61.6	99.8	GSM47039	hst-15 29	GSE2473	Small RNA biogenesis mutants
61.3	99.8	GSM284398	Arabidopsis GGSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
61.0	99.8	GSM47037	hst-15 27	GSE2473	Small RNA biogenesis mutants
60.5	99.8	GSM147964	WT Globular Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
59.3	99.8	GSM10480	lec1-1 Cotyledon Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
56.0	99.8	GSM47041	hyl1 31	GSE2473	Small RNA biogenesis mutants
51.7	99.8	GSM147965	lec1-1 Globular Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
49.6	99.8	GSM10479	lec1-1 Cotyledon Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
43.7	99.8	GSM187243	Col_HL_B	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
42.0	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937569	-	-	-
41.8	99.8	GSM74907	ice1_6H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
41.6	99.8	GSM187244	Col-O_HL_C	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
41.4	99.8	GSM10449	WT Cotyledon Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
39.4	99.8	GSM147963	WT Globular Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
39.4	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937515	-	-	-
39.1	99.8	GSM47052	rdr6-15 42	GSE2473	Small RNA biogenesis mutants
38.4	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937497	-	-	-
37.4	99.7	GSM74903	ice1_no treatment_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
37.1	99.7	GSM133820	Yang_1-5_young-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
35.2	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937479	-	-	-
35.0	99.7	GSM142652	MC002_ATH1_A10.3-dubos-wth	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
33.8	99.7	GSM47013	Col-0 3	GSE2473	Small RNA biogenesis mutants
33.4	99.7	GSM128783	Somerville_1-6_flower-GH5_Rep1_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
30.2	99.7	GSM47029	dcl2-1 19	GSE2473	Small RNA biogenesis mutants
30.0	99.7	GSM47049	Col-0 39	GSE2473	Small RNA biogenesis mutants
29.9	99.7	GSM47012	Col-0 2	GSE2473	Small RNA biogenesis mutants
29.5	99.7	GSM284397	Arabidopsis GGSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
29.2	99.7	GSM10448	WT Cotyledon Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
28.8	99.7	GSM142651	MC002_ATH1_A10.2-dubos-wth	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
27.6	99.7	GSM74908	ice1_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
27.4	99.7	GSM74905	ice1_3H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
26.3	99.7	GSM131688	ATGE_77_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
26.2	99.7	GSM47011	Col-0 1	GSE2473	Small RNA biogenesis mutants
24.8	99.6	GSM142650	MC002_ATH1_A10.1-dubos-wth	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
24.6	99.6	GSM253201	Nontransgenic(ga1-3rgargl2)-DEX-REP3	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
24.3	99.6	GSM131631	ATGE_58_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
23.8	99.6	GSM131578	ATGE_31_C2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
23.6	99.6	GSM74904	ice1_3H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
23.5	99.6	GSM133301	NO.26	GSE5699	AtGenExpress: ARR21C overexpression
23.5	99.6	GSM187249	cry1_HL_B	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
23.4	99.6	GSM47050	Col-0 40	GSE2473	Small RNA biogenesis mutants
23.4	99.6	GSM271066	Arabidopsis plant (tga2-5-6), 4h_control_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
23.3	99.6	ArrayExpress	E-MEXP-1262-raw-cel-1502676166	-	-	-
23.1	99.6	GSM74909	ice1_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
23.0	99.6	GSM131630	ATGE_58_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
22.7	99.6	GSM131576	ATGE_31_A2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
22.6	99.6	GSM133300	NO.25	GSE5699	AtGenExpress: ARR21C overexpression
22.5	99.6	ArrayExpress	E-TABM-63-raw-cel-681136686	-	-	-
22.3	99.6	GSM131632	ATGE_58_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
21.9	99.6	GSM128784	Somerville_1-7_flower-GH6_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
21.8	99.6	ArrayExpress	E-TABM-63-raw-cel-681136648	-	-	-
21.2	99.6	GSM47035	hen1 25	GSE2473	Small RNA biogenesis mutants
20.7	99.6	GSM131577	ATGE_31_B2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
20.6	99.6	GSM47045	rdr1-1 35	GSE2473	Small RNA biogenesis mutants
20.2	99.6	GSM131587	ATGE_34_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.9	99.6	GSM133302	NO.27	GSE5699	AtGenExpress: ARR21C overexpression
19.9	99.6	GSM269815	T6 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
19.9	99.6	GSM271060	Arabidopsis plant (Col-0), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
19.8	99.6	GSM106917	opr3_JA_22 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
19.5	99.6	GSM131586	ATGE_34_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.4	99.6	GSM47028	dcl2-1 18	GSE2473	Small RNA biogenesis mutants
19.2	99.6	GSM187255	hy5_HL_C	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
19.2	99.6	ArrayExpress	E-TABM-63-raw-cel-681137339	-	-	-
19.0	99.5	GSM271073	Arabidopsis plant (tga2-5-6), 4h_response to phytoprostane A1_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
19.0	99.5	GSM131689	ATGE_77_E	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
18.4	99.5	ArrayExpress	E-TABM-63-raw-cel-681137230	-	-	-
18.1	99.5	GSM62702	arf6 arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
18.1	99.5	GSM187254	hy5_HL_B	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
18.0	99.5	ArrayExpress	E-TABM-63-raw-cel-681137264	-	-	-
18.0	99.5	ArrayExpress	E-TABM-63-raw-cel-681137301	-	-	-
17.7	99.5	GSM253199	Nontransgenic(ga1-3rgargl2)-DEX-REP1	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
17.6	99.5	GSM131690	ATGE_77_F	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
17.6	99.5	ArrayExpress	E-MEXP-1262-raw-cel-1502676096	-	-	-
17.5	99.5	ArrayExpress	E-MEXP-1246-raw-cel-1504120171	-	-	-
17.5	99.5	GSM47024	dcl1-7 14	GSE2473	Small RNA biogenesis mutants
17.5	99.5	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
17.4	99.5	GSM131588	ATGE_35_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.4	99.5	GSM47051	Col-0 41	GSE2473	Small RNA biogenesis mutants
17.4	99.5	GSM131617	ATGE_53_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.4	99.5	GSM131580	ATGE_32_B2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.3	99.5	GSM131582	ATGE_33_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.2	99.5	GSM47044	rdr1-1 34	GSE2473	Small RNA biogenesis mutants
17.1	99.5	GSM131585	ATGE_34_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.0	99.5	GSM106912	opr3_JA 8hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
17.0	99.5	GSM47054	rdr6-15 44	GSE2473	Small RNA biogenesis mutants
17.0	99.5	GSM187253	hy5_HL_A	GSE7743	Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High Irradiance
16.9	99.5	GSM131590	ATGE_35_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.9	99.5	GSM253200	Nontransgenic(ga1-3rgargl2)-DEX-REP2	GSE10019	Identification of RGA downstream genes by using steroid-inducible system
16.8	99.5	GSM271080	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
16.6	99.5	GSM131616	ATGE_53_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.1	99.5	GSM47053	rdr6-15 43	GSE2473	Small RNA biogenesis mutants
15.9	99.5	GSM271059	Arabidopsis plant (Col-0), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
15.8	99.5	GSM47026	dcl1-7 16	GSE2473	Small RNA biogenesis mutants
15.7	99.5	GSM131589	ATGE_35_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.7	99.5	GSM133806	Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
15.6	99.5	GSM131584	ATGE_33_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.5	99.5	GSM47036	hen1 26	GSE2473	Small RNA biogenesis mutants
15.3	99.4	GSM131615	ATGE_53_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.1	99.4	GSM311295	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
15.0	99.4	ArrayExpress	E-MEXP-1262-raw-cel-1502676015	-	-	-
15.0	99.4	GSM131581	ATGE_32_C2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
14.9	99.4	GSM131679	ATGE_51_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
14.8	99.4	GSM62699	arf6/arf6 ARF8/arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
14.6	99.4	GSM47023	dcl1-7 13	GSE2473	Small RNA biogenesis mutants
14.6	99.4	GSM131666	ATGE_46_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
14.5	99.4	GSM47025	dcl1-7 15	GSE2473	Small RNA biogenesis mutants
14.4	99.4	ArrayExpress	E-MEXP-1246-raw-cel-1504120201	-	-	-
14.3	99.4	ArrayExpress	E-TABM-63-raw-cel-681137087	-	-	-
14.3	99.4	ArrayExpress	E-TABM-63-raw-cel-681137160	-	-	-
14.2	99.4	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
14.0	99.4	GSM131583	ATGE_33_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
13.9	99.4	GSM131680	ATGE_51_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.6	99.4	GSM131664	ATGE_46_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.6	99.4	GSM45209	00304WT_2	GSE2406	WTv.AOXantisense
13.5	99.4	GSM131665	ATGE_46_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.5	99.4	GSM131681	ATGE_51_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.2	99.4	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
13.1	99.4	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
13.0	99.4	GSM128781	Somerville_1-4_flower-GC5_Rep1_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
12.9	99.3	ArrayExpress	E-MEXP-148-raw-cel-350528914	-	-	-
12.6	99.3	ArrayExpress	E-MEXP-1246-raw-cel-1504120231	-	-	-
12.6	99.3	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.4	99.3	GSM47030	dcl2-1 20	GSE2473	Small RNA biogenesis mutants
12.3	99.3	GSM131579	ATGE_32_A2	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.2	99.3	GSM131621	ATGE_55_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.1	99.3	GSM131622	ATGE_55_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.0	99.3	GSM67084	Arabidopsis_Stigma01	GSE3056	Arabidopsis Pollination Study
11.9	99.3	GSM106914	opr3_JA_8 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.9	99.3	GSM106909	opr3-JA_2 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.9	99.3	GSM62690	arf6/arf6 ARF8/arf8 flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
11.8	99.3	GSM131633	ATGE_59_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.8	99.3	GSM131623	ATGE_55_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.8	99.3	GSM131595	ATGE_37_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.8	99.3	GSM133054	2796	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
11.7	99.3	GSM131684	ATGE_52_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.6	99.3	GSM131683	ATGE_52_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.6	99.3	GSM47034	hen1 24	GSE2473	Small RNA biogenesis mutants
11.5	99.3	GSM131596	ATGE_37_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.5	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526920	-	-	-
11.5	99.3	GSM131682	ATGE_52_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.4	99.3	GSM62698	arf6/arf6 ARF8/arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
11.4	99.3	GSM62692	arf6 arf8 flowers_stage 1-14_untreated	GSE2847	Auxin induction in wild type and arf6 arf8 flowers
11.3	99.3	GSM106913	opr3_JA_8 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.3	99.3	GSM271058	Arabidopsis plant (Col-0), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
11.3	99.3	ArrayExpress	E-MEXP-1592-raw-cel-1617526912	-	-	-
11.2	99.2	ArrayExpress	E-MEXP-1592-raw-cel-1617526984	-	-	-
11.1	99.2	GSM142653	MC002_ATH1_A11.1-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.9	99.2	GSM131640	ATGE_92_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.7	99.2	GSM131641	ATGE_92_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.6	99.2	GSM131065	Hammond_2-6_pho1mutant_Rep3_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
10.5	99.2	GSM142654	MC002_ATH1_A11.2-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.4	99.2	GSM142655	MC002_ATH1_A11.3-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.4	99.2	ArrayExpress	E-MEXP-1246-raw-cel-1504120261	-	-	-
10.4	99.2	GSM133068	2530	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.3	99.2	GSM74902	ice1_no treatment_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
10.3	99.2	GSM131639	ATGE_92_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.2	99.2	ArrayExpress	E-MEXP-1246-raw-cel-1504120321	-	-	-
10.2	99.2	GSM131634	ATGE_59_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.2	99.2	GSM47043	rdr1-1 33	GSE2473	Small RNA biogenesis mutants
10.1	99.2	GSM47033	dcl3-1 23	GSE2473	Small RNA biogenesis mutants
9.8	99.1	ArrayExpress	E-ATMX-31-raw-cel-1516947916	-	-	-
9.7	99.1	GSM47027	dcl1-7 17	GSE2473	Small RNA biogenesis mutants
9.7	99.1	GSM131635	ATGE_59_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.6	99.1	ArrayExpress	E-MEXP-1592-raw-cel-1617526888	-	-	-
9.6	99.1	ArrayExpress	E-MEXP-1451-raw-cel-1585200362	-	-	-
9.5	99.1	GSM67079	Arabidopsis_Ovary02	GSE3056	Arabidopsis Pollination Study
9.5	99.1	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
9.5	99.1	GSM47031	dcl3-121	GSE2473	Small RNA biogenesis mutants
9.5	99.1	GSM47048	rdr2-1 38	GSE2473	Small RNA biogenesis mutants
9.3	99.1	GSM133818	Yang_1-3_young-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
9.1	99.1	GSM128724	Pieterse_1-10_Prapae-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
9.0	99.1	GSM131662	ATGE_29_B2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.9	99.0	GSM131661	ATGE_29_A2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.7	99.0	ArrayExpress	E-MEXP-1360-raw-cel-1561600622	-	-	-
8.6	99.0	GSM131603	ATGE_41_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.6	99.0	GSM131663	ATGE_29_C2	GSE5633	AtGenExpress: Developmental series (shoots and stems)

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