Specifically-expressed experiments

Gene ID	At4g12550
Gene name	AIR1
Functional description	isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
57.8	99.8	GSM245917	wild type dark replicate 2	GSE9728	COP9 signalosome (csn) mutant analysis
46.5	99.8	GSM265462	Arabidopsis, whole roots, standard conditions, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
46.3	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062243239	-	-	-
46.0	99.8	GSM231197	wild-type at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
40.4	99.8	GSM231198	wild-type at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
37.6	99.7	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
37.2	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
36.7	99.7	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
35.9	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
35.7	99.7	GSM265464	Arabidopsis, whole roots, -Fe, 3 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
34.7	99.7	GSM179959	Arabidopsis roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
34.1	99.7	GSM231204	chl1 at T0.5, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
32.2	99.7	GSM231203	chl1 at T0.5, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
32.1	99.7	GSM179967	Arabidopsis aux1 mutant roots, air treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
31.8	99.7	GSM245916	wild type dark replicate 1	GSE9728	COP9 signalosome (csn) mutant analysis
29.6	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
29.6	99.7	GSM231194	wild-type at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
28.5	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
27.7	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243048	-	-	-
26.4	99.7	GSM179970	Arabidopsis aux1 mutant roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
26.1	99.7	GSM265465	Arabidopsis, whole roots, -Fe, 6 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
26.0	99.7	GSM179973	Arabidopsis roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
25.6	99.7	GSM265468	Arabidopsis, whole roots, -Fe, 12 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
25.1	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
24.8	99.6	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
24.4	99.6	GSM142730	CH001_ATH1_A009-Hampt-wsc_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
24.3	99.6	ArrayExpress	E-ATMX-31-raw-cel-1516947984	-	-	-
24.2	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
24.1	99.6	GSM265466	Arabidopsis, whole roots, -Fe, 6 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
23.8	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243390	-	-	-
23.5	99.6	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.5	99.6	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.4	99.6	GSM179961	Arabidopsis roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.3	99.6	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
23.2	99.6	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
22.9	99.6	GSM231196	wild-type at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
22.5	99.6	GSM179974	Arabidopsis roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
22.4	99.6	GSM231202	chl1 at T0.5, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
22.3	99.6	GSM142727	CH001_ATH1_A006-Hampt-akb	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
22.2	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922572	-	-	-
22.0	99.6	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
21.5	99.6	GSM231200	chl1 at T0, biological rep2	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
20.8	99.6	GSM142728	CH001_ATH1_A007-Hampt-c4b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
20.7	99.6	GSM9588	arf19-1_+IAA_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
20.4	99.6	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
20.3	99.6	GSM291124	root - 21% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
20.3	99.6	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
20.0	99.6	GSM9585	arf19-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
20.0	99.6	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.5	99.6	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
19.3	99.6	GSM9603	iaa17-6_control_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
18.9	99.5	GSM9612	axr3-1_+IAA_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
18.8	99.5	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
18.6	99.5	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
18.6	99.5	GSM142724	CH001_ATH1_A003-Hampt-c4a_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
18.6	99.5	GSM290828	root - 04% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
18.6	99.5	GSM142723	CH001_ATH1_A002-Hampt-aka	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
18.5	99.5	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
18.4	99.5	GSM265463	Arabidopsis, whole roots, -Fe, 3 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
18.3	99.5	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
18.2	99.5	GSM9607	iaa17-6_+IAA_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
18.2	99.5	GSM25861	Negative Control - 4	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
18.0	99.5	GSM9579	nph4-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
17.6	99.5	GSM157335	Coates_1-7_Col-3_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
17.5	99.5	GSM9586	arf19-1_+IAA_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
17.5	99.5	GSM231199	chl1 at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
17.3	99.5	GSM231193	wild-type at T0, biological rep1	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
17.0	99.5	GSM157333	Coates_1-5_Col-0_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
17.0	99.5	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
16.9	99.5	GSM9582	nph4-1_+IAA_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
16.8	99.5	GSM27365	lec1-1 Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
16.8	99.5	GSM9594	nph4-1arf19-1_+IAA_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
16.6	99.5	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
16.3	99.5	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
16.1	99.5	ArrayExpress	E-ATMX-31-raw-cel-1516948001	-	-	-
16.1	99.5	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
16.0	99.5	GSM9584	arf19-1_control_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
15.9	99.5	GSM290759	root - 01% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
15.8	99.5	GSM9587	arf19-1_+IAA_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
15.8	99.5	GSM133142	S1500_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
15.7	99.5	GSM133131	S1500_0H_A	GSE5688	AtGenExpress: Response to sulfate limitation
15.6	99.5	GSM265461	Arabidopsis, whole roots, standard conditions, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
15.4	99.5	GSM9613	axr3-1_+IAA_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
15.1	99.4	GSM9593	nph4-1arf19-1_+IAA_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
15.1	99.4	GSM265469	Arabidopsis, whole roots, -Fe, 24 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
15.0	99.4	GSM142733	CH001_ATH1_A012-Hampt-c1c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
15.0	99.4	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
15.0	99.4	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.9	99.4	GSM142729	CH001_ATH1_A008-Hampt-c1b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
14.9	99.4	GSM9619	i5i6i19_+IAA_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.8	99.4	GSM265470	Arabidopsis, whole roots, -Fe, 24 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
14.8	99.4	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
14.7	99.4	GSM9616	i5i6i19_control_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.6	99.4	GSM9590	nph4-1arf19-1_control_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
14.6	99.4	GSM25863	IAA Treated - 2	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
14.6	99.4	GSM157339	Coates_1-11_Col-3_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
14.5	99.4	GSM9608	arx3-1_control_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.5	99.4	GSM9591	nph4-1arf19-1_control_3	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
14.4	99.4	GSM179960	Arabidopsis roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.3	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922553	-	-	-
14.1	99.4	GSM9611	axr3-1_+IAA_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.1	99.4	GSM25858	Negative control - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
14.1	99.4	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.1	99.4	GSM9605	iaa17-6_+IAA_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.1	99.4	GSM133135	S1500_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.0	99.4	GSM142726	CH001_ATH1_A005-Hampt-wsb_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
14.0	99.4	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
14.0	99.4	GSM9618	i5i6i19_+IAA_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
14.0	99.4	GSM9614	i5i6i19_control_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
13.9	99.4	GSM157338	Coates_1-10_ara1OX_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
13.8	99.4	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
13.8	99.4	GSM9617	i5i6i19_+IAA_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
13.7	99.4	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
13.6	99.4	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
13.6	99.4	GSM133806	Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
13.5	99.4	GSM157327	Hammond_3-11_Potassium-starved-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.5	99.4	GSM9577	nph4-1_control_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
13.5	99.4	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
13.4	99.4	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.4	99.4	GSM25869	A Treated - 4	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
13.3	99.4	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
13.3	99.4	GSM218595	Whole roots 3.5hr KNO3 treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.2	99.4	GSM133801	Werner_1-2_wildtype-24hr-control(c4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
13.2	99.4	GSM25860	Negative Control - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
13.2	99.4	GSM9615	i5i6i19_control_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
13.1	99.4	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
12.9	99.3	GSM9628	Col_+IAA_A2_3	GSE630	Auxin-mediated gene expression
12.9	99.3	GSM9583	arf19-1_control_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
12.8	99.3	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
12.8	99.3	GSM131555	ATGE_3_A	GSE5631	AtGenExpress: Developmental series (roots)
12.7	99.3	GSM131556	ATGE_3_B	GSE5631	AtGenExpress: Developmental series (roots)
12.7	99.3	GSM9580	nph4-1_+IAA_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
12.7	99.3	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.6	99.3	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
12.5	99.3	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
12.4	99.3	GSM40552	Total RNA, non-stressed	GSE2218	Changes in transcript abundance and association with large polysomes in response to hypoxia stress
12.4	99.3	GSM319207	35S-MIF1 line#127, dark grown	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
12.4	99.3	GSM133141	S1500_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
12.3	99.3	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.3	99.3	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
12.2	99.3	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
12.1	99.3	GSM27361	WT Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
12.1	99.3	GSM133137	S1500_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
12.1	99.3	GSM9599	Col_+IAA_I_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
12.0	99.3	GSM25862	IAA treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
11.9	99.3	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.9	99.3	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.9	99.3	GSM142721	CH001_ATH1_A001-Hampt-wsa	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.9	99.3	GSM142821	PJ002_ATH1_A2-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
11.8	99.3	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
11.7	99.3	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.7	99.3	GSM9597	Col_control_I_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
11.7	99.3	GSM9610	axr3-1_control_3	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
11.7	99.3	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
11.6	99.3	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
11.5	99.3	GSM131557	ATGE_3_C	GSE5631	AtGenExpress: Developmental series (roots)
11.5	99.3	GSM128693	Heinekamp_1-2_control-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
11.2	99.2	GSM25864	IAA Treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
11.1	99.2	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.0	99.2	GSM9574	Col_+IAA_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
11.0	99.2	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.0	99.2	GSM157334	Coates_1-6_ara1OX_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.9	99.2	GSM9601	iaa17-6_control_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
10.8	99.2	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.7	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922533	-	-	-
10.7	99.2	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
10.6	99.2	GSM245918	wild type dark replicate 3	GSE9728	COP9 signalosome (csn) mutant analysis
10.6	99.2	GSM133807	Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
10.5	99.2	GSM142820	PJ002_ATH1_A1-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
10.5	99.2	GSM265423	Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.4	99.2	GSM25873	IAA/A Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
10.4	99.2	GSM25865	IAA Treated - 4	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
10.4	99.2	GSM133800	Werner_1-1_wildtype-2hr-control(c2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
10.3	99.2	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.3	99.2	GSM218592	Whole roots 3.5hr KCl control treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.1	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922318	-	-	-
10.1	99.2	GSM157331	Coates_1-3_Col-3_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.0	99.2	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.0	99.2	GSM9589	nph4-1arf19-1_control_1	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
10.0	99.2	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
10.0	99.2	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.8	99.1	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
9.8	99.1	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.8	99.1	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.8	99.1	GSM25875	IAA/A Treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.8	99.1	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.8	99.1	GSM9595	Col_control_I_1	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.8	99.1	GSM265467	Arabidopsis, whole roots, -Fe, 12 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.7	99.1	GSM128695	Heinekamp_1-4_cs-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
9.6	99.1	GSM157314	Hammond_3-4_Control-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.6	99.1	GSM157332	Coates_1-4_ara1/2mut_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.5	99.1	GSM291101	root - 21% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.5	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836061	-	-	-
9.5	99.1	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
9.4	99.1	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
9.4	99.1	GSM158705	HY213-ESTRADIOL-REP2	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
9.4	99.1	GSM25874	IAA/A Treated - 2	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.4	99.1	GSM9606	iaa17-6_+IAA_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.4	99.1	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.4	99.1	ArrayExpress	E-MEXP-711-raw-cel-1563002396	-	-	-
9.3	99.1	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
9.3	99.1	GSM9578	nph4-1_control_2	GSE627	Auxin mediated gene expression in WT, arf7, arf19 and arf7 arf19 mutants
9.3	99.1	GSM9609	axr3-1_control_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.2	99.1	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.2	99.1	GSM290825	root - 04% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.1	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922731	-	-	-
9.1	99.1	ArrayExpress	E-MEXP-828-raw-cel-1156922794	-	-	-
9.1	99.1	GSM9602	iaa17-6_control_2	GSE629	Auxin-mediated gene expression in WT, iaa17, axr3 and iaa5iaa6iaa19 mutants
9.1	99.1	GSM25870	B Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.1	99.1	ArrayExpress	E-MEXP-1304-raw-cel-1530618235	-	-	-
9.0	99.1	GSM157337	Coates_1-9_Col-0_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.0	99.1	GSM184632	Arabidopsis, whole roots, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
9.0	99.1	GSM290757	root - 01% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.0	99.1	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
8.9	99.0	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.9	99.0	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
8.9	99.0	GSM319205	35S-MIF1 line #124, dark grown, replicate1	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
8.9	99.0	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
8.8	99.0	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis

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