Specifically-expressed experiments

Gene ID At4g12490
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Functional description F:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
109.099.9GSM245913csn5 (csn5a-2 csn5b) mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
102.199.9GSM245914csn5 (csn5a-2 csn5b) mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
101.699.9GSM245915csn5 (csn5a-2 csn5b) mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
90.699.9GSM128664Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
85.699.9GSM245910csn3-1 mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
82.499.9GSM245911csn3-1 mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
80.199.9GSM245912csn3-1 mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
72.599.9GSM128663Underwood_1-16_Cor-hrpS-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
68.799.9GSM245926csn5 (csn5a-2 csn5b) mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
66.499.8GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
64.699.8GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysisLink to GEO
61.899.8GSM245925csn5 (csn5a-2 csn5b) mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
61.299.8GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
56.199.8GSM258793pvip1 pvip2 seedling biological replicate 2GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
56.099.8GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
55.799.8GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
55.399.8GSM128665Underwood_1-17_Cor-hrpS-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
52.799.8GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
52.399.8GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
51.299.8ArrayExpressE-MEXP-1094-raw-cel-1379507273---
46.599.8GSM131141AtGen_B-27_2-6-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
46.199.8ArrayExpressE-MEXP-1094-raw-cel-1379507313---
45.799.8GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
44.899.8GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
44.599.8GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
44.099.8GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
43.699.8GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
43.399.8GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
43.299.8GSM88050csn4-1_mutant replicate 2GSE3865CSN4-1 mutant analysisLink to GEO
43.099.8GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
43.099.8GSM245927csn5 (csn5a-2 csn5b) mutant dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
42.199.8GSM258794pvip1 pvip2 seedling biological replicate 3GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
41.099.8GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
40.299.8GSM88049csn4-1_mutant replicate 1GSE3865CSN4-1 mutant analysisLink to GEO
39.999.8GSM245921csn3-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
39.499.8GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
38.599.8GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
38.299.8GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
37.699.7GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
36.399.7GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.899.7GSM128714Thorlby_1-3_24h-post-freeze_REP3_ATH1GSE5524Gene Expression During Recovery from FreezingLink to GEO
34.999.7GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
34.899.7GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
34.099.7GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
33.899.7GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
33.599.7GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
33.499.7GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
33.399.7GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
32.799.7GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.799.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.199.7GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
31.899.7GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.499.7GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
31.199.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
30.999.7GSM142881GW001_ATH1_A26-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
30.599.7GSM74908ice1_24H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
30.499.7ArrayExpressE-TABM-52-raw-cel-1583683422---
30.099.7GSM128669Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
29.799.7GSM131126AtGen_B-12_1-5-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
29.599.7GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
28.599.7GSM258792pvip1 pvip2 seedling biological replicate 1GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
28.299.7GSM131125AtGen_B-11_1-4-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
27.399.7GSM74904ice1_3H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
27.199.7GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
26.999.7GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
26.199.7GSM184927Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
26.099.7ArrayExpressE-MEXP-547-raw-cel-863346394---
25.799.7GSM151704gh3.5-1D 48 hpi, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
25.699.7GSM74902ice1_no treatment_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
25.299.6ArrayExpressE-MEXP-547-raw-cel-863346385---
25.199.6GSM74906ice1_6H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
24.799.6GSM184929Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
24.499.6ArrayExpressE-MEXP-547-raw-cel-863346358---
24.099.6GSM184930Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
24.099.6GSM245920csn3-1 mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
23.899.6ArrayExpressE-MEXP-547-raw-cel-863346367---
23.599.6GSM142880GW001_ATH1_A25-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
23.399.6GSM128670Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
23.099.6GSM151705gh3.5-1D 48 hpi, biological replicate 3GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
22.999.6GSM151703gh3.5-1D 48 hpi, biological replicate 1GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
22.899.6ArrayExpressE-MEXP-547-raw-cel-863346376---
22.599.6GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
22.499.6ArrayExpressE-MEXP-838-raw-cel-1160703895---
21.599.6GSM184932Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
21.599.6ArrayExpressE-TABM-52-raw-cel-1583683246---
21.599.6GSM184935Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
20.799.6GSM142843MG001_ATH1_A24-Torres-7N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.099.6ArrayExpressE-MEXP-711-raw-cel-1563002902---
19.999.6GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.899.6GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.699.6ArrayExpressE-MEXP-547-raw-cel-863346403---
19.699.6ArrayExpressE-MEXP-838-raw-cel-1160703933---
19.399.6GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.399.6GSM217153High R:FR 16 degreesGSE8745Low R:FR treatment at 16 and 22 degreesLink to GEO
18.799.5ArrayExpressE-MEXP-739-raw-cel-1099467267---
17.699.5ArrayExpressE-MEXP-739-raw-cel-1099467240---
17.299.5GSM184926Arabidopsis, whole roots, standard conditions, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
17.199.5GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.199.5ArrayExpressE-MEXP-739-raw-cel-1099467330---
17.099.5GSM184928Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
16.999.5ArrayExpressE-MEXP-739-raw-cel-1099467294---
16.699.5ArrayExpressE-MEXP-547-raw-cel-863346421---
16.499.5ArrayExpressE-MEXP-475-raw-cel-680982359---
16.499.5ArrayExpressE-MEXP-547-raw-cel-863346448---
16.199.5GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.999.5GSM25867A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
15.399.4GSM128667Underwood_1-20_Mock-Inoculum-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.099.4ArrayExpressE-MEXP-475-raw-cel-680982395---
14.699.4ArrayExpressE-MEXP-475-raw-cel-680982431---
14.499.4ArrayExpressE-MEXP-739-raw-cel-1099467249---
13.799.4ArrayExpressE-NASC-76-raw-cel-1359878976---
13.599.4GSM128666Underwood_1-19_Mock-Inoculum-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.399.4ArrayExpressE-MEXP-739-raw-cel-1099467303---
13.199.4GSM131487ATGE_97_BGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
12.799.3GSM142842MG001_ATH1_A23-Torres-7N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.799.3ArrayExpressE-MEXP-739-raw-cel-1099467339---
12.399.3ArrayExpressE-MEXP-807-raw-cel-1173273032---
11.799.3ArrayExpressE-MEXP-807-raw-cel-1173272921---
11.699.3ArrayExpressE-MEXP-547-raw-cel-863346466---
11.199.2GSM245922csn4-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.199.2GSM151701Col-0 48 hpi, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
10.999.2GSM131488ATGE_97_CGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
10.699.2ArrayExpressE-MEXP-444-raw-cel-670291488---
10.599.2ArrayExpressE-NASC-76-raw-cel-1359878900---
10.299.2GSM74909ice1_24H Cold_Rep2GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
10.299.2ArrayExpressE-TABM-52-raw-cel-1583683262---
10.299.2GSM128679Underwood_1-32_Mock-Inoculum-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.199.2ArrayExpressE-TABM-52-raw-cel-1583683214---
10.099.2GSM125256Seedling_OETOP6B_rep1GSE5465Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genesLink to GEO
10.099.2GSM131486ATGE_97_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
9.999.1GSM133300NO.25GSE5699AtGenExpress: ARR21C overexpressionLink to GEO
9.999.1ArrayExpressE-MEXP-547-raw-cel-863346412---
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467312---
9.799.1GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
9.799.1GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.399.1GSM142879GW001_ATH1_A24-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.299.1ArrayExpressE-MEXP-739-raw-cel-1099467321---
9.099.1ArrayExpressE-MEXP-739-raw-cel-1099467276---
9.099.1ArrayExpressE-MEXP-711-raw-cel-1563002839---
8.999.0ArrayExpressE-MEXP-739-raw-cel-1099467285---
8.999.0GSM217165High R:FR 22 degreesGSE8745Low R:FR treatment at 16 and 22 degreesLink to GEO
8.999.0GSM25859Negative Control - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
8.899.0GSM142878GW001_ATH1_A23-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
8.899.0GSM133302NO.27GSE5699AtGenExpress: ARR21C overexpressionLink to GEO
8.899.0GSM142876GW001_ATH1_A21-Warre-00fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
8.799.0GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiationLink to GEO
8.799.0GSM133301NO.26GSE5699AtGenExpress: ARR21C overexpressionLink to GEO



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