Specifically-expressed experiments

Gene ID	At4g09040
Gene name	RNA recognition motif (RRM)-containing protein
Functional description	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:chloroplast stroma, chloroplast;MPFOBA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
87.4	99.9	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
44.9	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.2	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
32.8	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.5	99.7	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.3	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.0	99.7	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
28.7	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.4	99.7	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.2	99.7	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
26.3	99.7	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.2	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.1	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.7	99.6	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
23.5	99.6	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
21.9	99.6	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
21.3	99.6	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
20.8	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.0	99.5	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
18.5	99.5	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.0	99.5	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
16.9	99.5	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
16.7	99.5	GSM77055	00h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
16.2	99.5	GSM77056	00h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
15.9	99.5	GSM128759	Mittler_2-3_wildtype_Rep3_ATH1	GSE5530	Hydrogen peroxide stress and Zat12 over-expression in Arabidopsis.
15.2	99.4	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
15.2	99.4	ArrayExpress	E-MEXP-1344-raw-cel-1559561683	-	-	-
15.0	99.4	GSM189106	HSP90_Reduced_Control-2_Biological_Replicate_2_Technical_Replicate_1	GSE7796	Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 Levels
14.8	99.4	GSM269489	mkk2, no-treatment, rep-B	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
14.0	99.4	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.0	99.4	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
13.7	99.4	GSM77067	16h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
13.2	99.4	GSM77068	16h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
13.1	99.4	GSM77070	20h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
12.4	99.3	GSM128801	Zarka_2-5_MT-24HCA(SOIL)_Rep1_ATH1	GSE5535	Response to cold, soil grown plants
12.2	99.3	GSM77065	12h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
12.2	99.3	GSM131464	AtGen_6-9512_Heatstress(3h)+9hrecovery-Shoots-12.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
11.4	99.3	GSM77058	04h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
11.3	99.3	ArrayExpress	E-MEXP-547-raw-cel-863346394	-	-	-
11.0	99.2	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.8	99.2	GSM269484	mkk1, no-treatment, rep-C	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
10.7	99.2	GSM77062	08h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
10.3	99.2	GSM77064	12h Col-0 replicate A	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
10.1	99.2	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.0	99.2	GSM142862	GW001_ATH1_A7-Warre-2na	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
9.2	99.1	ArrayExpress	E-MEXP-1344-raw-cel-1559561593	-	-	-
9.0	99.1	GSM128804	Zarka_2-8_MT-7DCB(SOIL)_Rep2_ATH1	GSE5535	Response to cold, soil grown plants
8.9	99.0	GSM268008	Col-0, Time 0, rep-A	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
8.9	99.0	GSM131503	ATGE_10_C	GSE5630	AtGenExpress: Developmental series (leaves)
8.7	99.0	GSM189108	HSP90_Reduced_RNAi-A1_Biological_Replicate_1	GSE7796	Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 Levels

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