Specifically-expressed experiments

Gene ID	At4g05020
Gene name	NDB2 (NAD(P)H dehydrogenase B2)
Functional description	F:disulfide oxidoreductase activity, oxidoreductase activity, FAD binding;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion;BOFPAM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
55.9	99.8	GSM134421	St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
45.6	99.8	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
42.5	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
41.6	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
34.8	99.7	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
33.9	99.7	GSM275643	flu_2h	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
32.3	99.7	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
31.0	99.7	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
30.9	99.7	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
29.2	99.7	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
27.8	99.7	GSM131329	AtGen_6-3621_Saltstress-Roots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
27.2	99.7	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
27.0	99.7	ArrayExpress	E-TABM-61-raw-cel-683343528	-	-	-
26.8	99.7	GSM134386	St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
25.5	99.7	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
25.1	99.6	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
24.7	99.6	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
24.5	99.6	GSM134422	St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
24.1	99.6	GSM134423	St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
23.4	99.6	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
23.3	99.6	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
22.9	99.6	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
22.8	99.6	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
21.9	99.6	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
21.8	99.6	GSM133973	Birnbaum_1-3_src5-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
21.8	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
21.4	99.6	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
21.3	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
20.6	99.6	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
20.3	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
20.2	99.6	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
20.1	99.6	GSM265473	Arabidopsis, whole roots, -Fe, 72 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
19.3	99.6	GSM272988	flu, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
18.9	99.5	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
18.7	99.5	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.2	99.5	GSM134405	St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
18.0	99.5	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
17.9	99.5	GSM184932	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
17.8	99.5	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
16.6	99.5	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
16.3	99.5	GSM131330	AtGen_6-3622_Saltstress-Roots-24.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
15.6	99.5	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
15.4	99.5	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
15.2	99.4	ArrayExpress	E-MEXP-475-raw-cel-680982449	-	-	-
15.1	99.4	GSM133025	BC181-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
14.9	99.4	GSM265472	Arabidopsis, whole roots, -Fe, 48 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
14.6	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
14.2	99.4	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
14.1	99.4	GSM134413	St.Clair_1-110_375_Van-0_0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
13.9	99.4	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.6	99.4	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.6	99.4	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.2	99.4	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
13.1	99.4	GSM265474	Arabidopsis, whole roots, -Fe, 72 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
13.0	99.4	GSM134351	St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
12.5	99.3	GSM134396	St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
12.4	99.3	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
12.4	99.3	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.3	99.3	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
12.0	99.3	GSM184926	Arabidopsis, whole roots, standard conditions, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
11.9	99.3	GSM184504	Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.9	99.3	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.9	99.3	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
11.7	99.3	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
11.4	99.3	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
11.4	99.3	ArrayExpress	E-MEXP-1797-raw-cel-1669768084	-	-	-
11.3	99.3	GSM184931	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
11.3	99.3	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
11.2	99.2	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
11.0	99.2	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.7	99.2	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.6	99.2	GSM131281	AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
10.5	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467384	-	-	-
10.5	99.2	ArrayExpress	E-ATMX-13-raw-cel-1556149871	-	-	-
10.5	99.2	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
10.4	99.2	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.4	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
10.3	99.2	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.3	99.2	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.1	99.2	GSM133811	Diamond_A-4-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
10.1	99.2	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
10.1	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
10.0	99.2	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
10.0	99.2	GSM131400	AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.9	99.1	GSM134458	St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
9.9	99.1	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.9	99.1	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.7	99.1	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.7	99.1	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
9.6	99.1	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
9.6	99.1	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.6	99.1	GSM184523	Stele root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.6	99.1	GSM133958	Fukuda_1-3_2A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.4	99.1	GSM128675	Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.4	99.1	GSM131282	AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.3	99.1	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.3	99.1	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.3	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
9.2	99.1	GSM134416	St.Clair_1-113_381_Van-0_0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
9.1	99.1	GSM133959	Fukuda_1-4_2B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.1	99.1	GSM131290	AtGen_6-2222_Osmoticstress-Roots-1.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
9.0	99.1	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.0	99.1	ArrayExpress	E-MEXP-550-raw-cel-871342517	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
8.8	99.0	GSM134378	St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
8.7	99.0	GSM133988	Birnbaum_1-18_wol-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
8.7	99.0	GSM128660	Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.6	99.0	GSM75514	Col-0 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation

Back to the CoP portal site

Back to the KAGIANA project homepage