Specifically-expressed experiments

Gene ID	At4g04620
Gene name	ATG8B (autophagy 8b)
Functional description	F:microtubule binding;P:autophagy;C:unknown;MOPFV

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
95.3	99.9	ArrayExpress	E-MEXP-509-raw-cel-829148703	-	-	-
63.7	99.8	GSM142737	DH001_ATH1_A4-UNM2	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
52.1	99.8	GSM142734	DH001_ATH1_A1-UNM1	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
45.5	99.8	ArrayExpress	E-MEXP-509-raw-cel-829148666	-	-	-
43.1	99.8	GSM142735	DH001_ATH1_A2-BCP1	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
38.5	99.8	ArrayExpress	E-MEXP-1443-raw-cel-1581869573	-	-	-
36.8	99.7	GSM205185	protoplast_KIN10_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
35.3	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148090	-	-	-
32.6	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148348	-	-	-
32.6	99.7	GSM173447	oxt6 mutant, biological rep3	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
31.0	99.7	GSM245917	wild type dark replicate 2	GSE9728	COP9 signalosome (csn) mutant analysis
30.2	99.7	GSM173446	oxt6 mutant, biological rep2	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
27.7	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148165	-	-	-
26.2	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148842	-	-	-
26.1	99.7	ArrayExpress	E-MEXP-509-raw-cel-829148420	-	-	-
25.6	99.7	GSM270870	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
24.1	99.6	GSM142738	DH001_ATH1_A5-BCP2	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
24.1	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148129	-	-	-
23.3	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
23.0	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148276	-	-	-
22.6	99.6	GSM270868	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
22.4	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148240	-	-	-
21.7	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148808	-	-	-
21.4	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148313	-	-	-
21.0	99.6	ArrayExpress	E-MEXP-509-raw-cel-829148385	-	-	-
20.2	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
19.9	99.6	GSM253165	48h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
19.3	99.6	GSM245916	wild type dark replicate 1	GSE9728	COP9 signalosome (csn) mutant analysis
18.5	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148738	-	-	-
18.1	99.5	ArrayExpress	E-MEXP-509-raw-cel-829148201	-	-	-
17.9	99.5	ArrayExpress	E-MEXP-1299-raw-cel-1519902871	-	-	-
16.7	99.5	GSM253166	48h into an extended nightC	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
16.1	99.5	GSM270866	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
15.9	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869515	-	-	-
15.5	99.5	GSM245918	wild type dark replicate 3	GSE9728	COP9 signalosome (csn) mutant analysis
15.0	99.4	GSM173445	oxt6 mutant, biological rep1	GSE7211	A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
14.7	99.4	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
14.6	99.4	GSM134307	Penfield_1-9_endosperm-PAC_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
13.9	99.4	GSM142625	MC002_ATH1_A1.3-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.7	99.4	ArrayExpress	E-MEXP-509-raw-cel-829148632	-	-	-
13.4	99.4	GSM133819	Yang_1-4_old-pod_Rep2_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
13.2	99.4	ArrayExpress	E-MEXP-1468-raw-cel-1591138919	-	-	-
12.6	99.3	GSM134306	Penfield_1-8_endosperm-PAC_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
12.5	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
12.5	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148456	-	-	-
12.4	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148877	-	-	-
12.3	99.3	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.2	99.3	GSM133731	Buchanan-Wollaston_A-3-bwoll-C0S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
12.1	99.3	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
12.0	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519902498	-	-	-
11.7	99.3	GSM62704	arf6 arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
11.6	99.3	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
11.4	99.3	ArrayExpress	E-MEXP-509-raw-cel-829148525	-	-	-
11.2	99.2	ArrayExpress	E-MEXP-509-raw-cel-829148913	-	-	-
11.2	99.2	GSM269494	mkk1/mkk2, no-treatment, rep-A	GSE10646	BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
11.1	99.2	GSM142902	WW001_ATH1_A1-WILLA-CON	GSE6181	Assembly of the cell wall pectic matrix.
11.1	99.2	GSM142821	PJ002_ATH1_A2-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
10.8	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
10.7	99.2	GSM133738	Buchanan-Wollaston_A-10-bwoll-Co2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
10.7	99.2	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.7	99.2	GSM142631	MC002_ATH1_A3.3-dubos-6kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.6	99.2	GSM106922	opr3_OPDA_2 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.4	99.2	GSM133736	Buchanan-Wollaston_A-8-bwoll-Ei2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
10.3	99.2	GSM142904	WW002_ATH1_A1-willa-CON-REP2	GSE6181	Assembly of the cell wall pectic matrix.
10.3	99.2	GSM142826	PJ002_ATH1_A7-jarvis-B1798	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
10.1	99.2	GSM133964	Fukuda_1-9_8A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.1	99.2	GSM106919	opr3_OPDA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.1	99.2	GSM311282	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
10.0	99.2	GSM106907	opr3_JA_0.5 hr_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
10.0	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467384	-	-	-
10.0	99.2	GSM142624	MC002_ATH1_A1.2-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.7	99.1	GSM142594	DB001_ATH1_A4-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
9.6	99.1	GSM142623	MC002_ATH1_A1.1-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.6	99.1	GSM270814	Arabidopsis cell culture, 4 h_control_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
9.1	99.1	GSM106934	opr3_OPDA_8 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.1	99.1	GSM142822	PJ002_ATH1_A3-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
9.0	99.1	GSM106825	opr3_0 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
9.0	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
9.0	99.1	GSM284395	Arabidopsis GPSc1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
9.0	99.1	GSM142596	DB001_ATH1_A6-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
9.0	99.1	ArrayExpress	E-MEXP-509-raw-cel-829148492	-	-	-
8.9	99.0	GSM133734	Buchanan-Wollaston_A-6-bwoll-NG2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
8.8	99.0	ArrayExpress	E-MEXP-449-raw-cel-676423362	-	-	-
8.8	99.0	GSM184905	Arabidopsis, root cells, protophloem, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
8.8	99.0	GSM62703	arf6 arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
8.8	99.0	GSM106921	opr3_OPDA_0.5 hr_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
8.7	99.0	GSM311281	Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
8.7	99.0	GSM142820	PJ002_ATH1_A1-jarvis-iae1	GSE6175	Clarification of the genetic basis of the iae1 and iae2 phenotypes
8.6	99.0	GSM133962	Fukuda_1-7_6A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.

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