Specifically-expressed experiments

Gene ID	At4g01700
Gene name	chitinase, putative
Functional description	F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
152.2	99.9	GSM134301	Penfield_1-3_endosperm-control_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
136.7	99.9	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
101.7	99.9	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
84.7	99.9	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
80.1	99.9	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
77.5	99.9	ArrayExpress	E-NASC-76-raw-cel-1359879158	-	-	-
73.1	99.9	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
72.8	99.9	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
68.1	99.9	GSM142851	MG001_ATH1_A4-Torres-2N1	GSE6176	Impact of Type III effectors on plant defense responses
64.9	99.8	ArrayExpress	E-NASC-76-raw-cel-1359878900	-	-	-
64.3	99.8	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
64.2	99.8	GSM131113	AtGen_B-41_3-6-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
61.4	99.8	ArrayExpress	E-NASC-76-raw-cel-1359878976	-	-	-
61.0	99.8	GSM142833	MG001_ATH1_A10-Torres-5N1	GSE6176	Impact of Type III effectors on plant defense responses
58.1	99.8	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
56.9	99.8	GSM109112	vte1-1(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
54.0	99.8	GSM134300	Penfield_1-2_endosperm-control_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
51.2	99.8	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
50.9	99.8	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
48.9	99.8	GSM142835	MG001_ATH1_A13-Torres-4N1	GSE6176	Impact of Type III effectors on plant defense responses
48.7	99.8	GSM134299	Penfield_1-1_endosperm-control_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
47.5	99.8	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
46.1	99.8	GSM133969	Birnbaum_1-20_LRC-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
45.0	99.8	GSM131140	AtGen_B-26_2-5-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
41.8	99.8	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
39.1	99.8	GSM131112	AtGen_B-40_3-5-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
37.0	99.7	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
36.1	99.7	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
36.0	99.7	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
35.7	99.7	GSM184478	Lateral Root Cap root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
33.6	99.7	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
32.9	99.7	GSM131141	AtGen_B-27_2-6-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
32.7	99.7	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
32.6	99.7	GSM131127	AtGen_B-13_1-6-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
32.3	99.7	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
31.9	99.7	GSM131126	AtGen_B-12_1-5-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
30.6	99.7	ArrayExpress	E-NASC-76-raw-cel-1359879106	-	-	-
29.3	99.7	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.1	99.7	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
28.8	99.7	GSM184481	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
28.7	99.7	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
28.6	99.7	GSM39206	Col_Chitin4	GSE2169	rre1 and rre2 mutants
28.2	99.7	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
28.1	99.7	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
27.3	99.7	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
27.0	99.7	GSM109109	wild-type(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
26.2	99.7	GSM109111	vte1-1(Col-0) 1 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
26.1	99.7	GSM299323	Wild Type Germinating Seeds With Solvent Treatment Only Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
25.4	99.6	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
25.2	99.6	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
24.1	99.6	GSM128686	Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
23.9	99.6	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
23.8	99.6	GSM131125	AtGen_B-11_1-4-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
23.7	99.6	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.4	99.6	GSM142849	MG001_ATH1_A2-Torres-1N3	GSE6176	Impact of Type III effectors on plant defense responses
23.3	99.6	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
22.4	99.6	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
20.9	99.6	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
20.6	99.6	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
20.4	99.6	GSM109114	vte2-1(Col-0) 1 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
20.3	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507233	-	-	-
20.2	99.6	ArrayExpress	E-MEXP-1094-raw-cel-1379507193	-	-	-
20.1	99.6	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
20.1	99.6	GSM128687	Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
20.0	99.6	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
19.9	99.6	ArrayExpress	E-NASC-76-raw-cel-1359878951	-	-	-
19.4	99.6	GSM184484	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.3	99.6	GSM218590	Protoplasted root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.8	99.5	GSM109113	vte2-1(Col-0) 1 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
17.6	99.5	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.6	99.5	GSM226550	Slice8JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.4	99.5	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.3	99.5	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
17.1	99.5	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
16.7	99.5	GSM299338	Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
16.3	99.5	GSM128685	Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.3	99.5	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.2	99.5	ArrayExpress	E-MEXP-1094-raw-cel-1379507553	-	-	-
15.4	99.5	GSM128674	Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
15.2	99.4	ArrayExpress	E-MEXP-547-raw-cel-863346430	-	-	-
14.8	99.4	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
14.6	99.4	ArrayExpress	E-MEXP-547-raw-cel-863346457	-	-	-
14.6	99.4	GSM299337	Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
14.6	99.4	ArrayExpress	E-MEXP-1094-raw-cel-1379507513	-	-	-
14.5	99.4	GSM299327	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
14.5	99.4	GSM128682	Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.4	99.4	GSM299333	Wild Type Germinating Seeds With Uniconazole Treatment Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
14.4	99.4	GSM109110	vte1-1(Col-0) 1 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
14.4	99.4	GSM109115	vte2-1(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
14.3	99.4	GSM299321	Wild Type Germinating Seeds With Solvent Treatment Only Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
14.3	99.4	ArrayExpress	E-MEXP-1607-raw-cel-1620685818	-	-	-
14.1	99.4	GSM299326	Wild Type Germinating Seeds With Solvent Treatment Only Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.9	99.4	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
13.7	99.4	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.6	99.4	GSM184491	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.4	99.4	GSM299329	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.3	99.4	GSM299324	Wild Type Germinating Seeds With Solvent Treatment Only Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.1	99.4	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
12.6	99.3	GSM299325	Wild Type Germinating Seeds With Solvent Treatment Only Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.6	99.3	GSM157358	Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1	GSE6829	Group II-A WRKY transcription factors and early leaf senescence
12.3	99.3	GSM128669	Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.0	99.3	GSM128683	Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.9	99.3	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.9	99.3	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
11.2	99.2	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
11.2	99.2	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
11.1	99.2	GSM109108	wild-type(Col-0) 1 day, biological rep2	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
11.1	99.2	ArrayExpress	E-MEXP-547-raw-cel-863346403	-	-	-
11.0	99.2	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
10.6	99.2	ArrayExpress	E-MEXP-547-raw-cel-863346376	-	-	-
10.5	99.2	GSM299322	Wild Type Germinating Seeds With Solvent Treatment Only Set 2 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.5	99.2	GSM299330	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
10.4	99.2	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
10.2	99.2	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
9.8	99.1	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
9.8	99.1	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
9.8	99.1	GSM299331	pkl Mutant Germinating Seeds With Solvent Treatment Only Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.8	99.1	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
9.7	99.1	GSM226537	L7SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.6	99.1	GSM109107	wild-type(Col-0) 1 day, biological rep1	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
9.5	99.1	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
9.5	99.1	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.4	99.1	GSM131134	AtGen_B-20_2-6-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.2	99.1	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
9.0	99.1	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
8.9	99.0	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
8.9	99.0	GSM299335	Wild Type Germinating Seeds With Uniconazole Treatment Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
8.8	99.0	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
8.7	99.0	GSM299336	Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
8.6	99.0	GSM226549	Slice7JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function

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