Specifically-expressed experiments

Gene ID At4g01010
Gene name ATCNGC13
Functional description member of Cyclic nucleotide gated channel family

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
193.9100.0GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
144.699.9GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
101.199.9GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
67.999.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
63.699.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
43.499.8ArrayExpressE-MEXP-546-raw-cel-863289404---
42.199.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
41.899.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
35.499.7ArrayExpressE-MEXP-807-raw-cel-1173273116---
34.999.7ArrayExpressE-MEXP-807-raw-cel-1173272948---
33.799.7ArrayExpressE-MEXP-546-raw-cel-863289450---
32.899.7GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
31.199.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
29.099.7GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
28.999.7GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
28.299.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
27.799.7GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
27.399.7GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
27.199.7ArrayExpressE-NASC-76-raw-cel-1359879132---
27.199.7GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
25.999.7ArrayExpressE-MEXP-546-raw-cel-863289506---
25.799.7GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
24.999.6GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
23.099.6GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
22.599.6GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
21.899.6GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
21.699.6GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
21.299.6GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
20.999.6ArrayExpressE-NASC-76-raw-cel-1359879028---
20.999.6ArrayExpressE-MEXP-807-raw-cel-1173273170---
20.099.6ArrayExpressE-MEXP-98-raw-cel-320188859---
18.799.5GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.799.5ArrayExpressE-NASC-76-raw-cel-1359878951---
18.499.5GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
17.899.5GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
17.599.5GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
17.499.5GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
17.199.5ArrayExpressE-MEXP-807-raw-cel-1173273088---
17.099.5GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.199.5GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
16.199.5ArrayExpressE-MEXP-546-raw-cel-863289586---
15.999.5ArrayExpressE-MEXP-1094-raw-cel-1379507313---
15.899.5ArrayExpressE-MEXP-807-raw-cel-1173273060---
15.899.5GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
15.899.5GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.599.5GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.399.4ArrayExpressE-MEXP-807-raw-cel-1173273223---
15.199.4GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
15.099.4GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.799.4GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
14.699.4GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
14.499.4GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
14.499.4GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
14.299.4GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
14.099.4ArrayExpressE-ATMX-25-raw-cel-1441077482---
14.099.4GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
13.999.4GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
13.899.4GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.699.4GSM131395AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
13.599.4GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.499.4ArrayExpressE-MEXP-98-raw-cel-320189079---
13.399.4ArrayExpressE-MEXP-546-raw-cel-863289424---
13.199.4GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.999.3ArrayExpressE-ATMX-25-raw-cel-1441077500---
12.899.3ArrayExpressE-MEXP-739-raw-cel-1099467276---
12.899.3GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
12.799.3GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.599.3GSM142907WW002_ATH1_A2-willa-ISOX-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
12.399.3ArrayExpressE-MEXP-1094-raw-cel-1379507273---
12.399.3GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
12.299.3GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.299.3GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
11.999.3GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
11.999.3GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
11.899.3GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
11.699.3GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
11.499.3GSM131489ATGE_100_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
11.499.3GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
11.399.3GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
11.399.3GSM269498mkk1/mkk2, 24h after BTH, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
11.299.2ArrayExpressE-MEXP-98-raw-cel-320188804---
11.199.2GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
10.999.2GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.899.2GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.899.2ArrayExpressE-MEXP-98-raw-cel-320189024---
10.899.2GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
10.699.2ArrayExpressE-MEXP-807-raw-cel-1173273144---
10.599.2GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
10.599.2GSM269496mkk1/mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
10.499.2GSM269497mkk1/mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
10.399.2GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.199.2GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.199.2GSM131396AtGen_6-7312_UV-Bstress-Shoots-3.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.199.2ArrayExpressE-MEXP-739-raw-cel-1099467339---
10.099.2GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
9.699.1GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.699.1GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.599.1GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
9.499.1ArrayExpressE-MEXP-807-raw-cel-1173273196---
9.399.1ArrayExpressE-ATMX-6-raw-cel-1308219150---
9.199.1ArrayExpressE-ATMX-27-raw-cel-1441080508---
9.099.1ArrayExpressE-MEXP-711-raw-cel-1563002902---
8.899.0GSM269499mkk1/mkk2, 24h after BTH, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
8.799.0ArrayExpressE-MEXP-739-raw-cel-1099467330---
8.699.0GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO



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