Specifically-expressed experiments

Gene ID At3g63520
Gene name CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)
Functional description Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.199.4GSM38670DSNPGSE2268Arabidopsis polysome microarrayLink to GEO
10.499.2GSM131103Broadley_1-1_A1-Bo+P-nutrient-replete_Rep1_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)Link to GEO
10.199.2GSM38668NSNPGSE2268Arabidopsis polysome microarrayLink to GEO
9.699.1GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.299.1ArrayExpressE-ATMX-32-raw-cel-1562974595---
9.199.1ArrayExpressE-ATMX-32-raw-cel-1562974681---
9.099.1GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
8.699.0GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
8.399.0GSM131587ATGE_34_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
7.898.9GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
7.498.8ArrayExpressE-MEXP-1443-raw-cel-1581869573---
7.498.8ArrayExpressE-ATMX-32-raw-cel-1562974409---
7.398.8ArrayExpressE-ATMX-32-raw-cel-1562974621---
6.998.7GSM131540ATGE_26_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
6.798.7GSM131541ATGE_26_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
6.698.7GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
6.598.6GSM131585ATGE_34_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
6.598.6GSM131304AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
6.498.6GSM297392At.StarchSD.WTSS3.WTR1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
6.298.6GSM157304JPritchard_A-6_API_Rep3_ATH1GSE6823The molecular basis of plant insect interactionsLink to GEO



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