Specifically-expressed experiments

Gene ID	At3g61490
Gene name	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Functional description	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
95.8	99.9	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
44.6	99.8	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
41.4	99.8	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
39.3	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
35.0	99.7	ArrayExpress	E-MEXP-1246-raw-cel-1504120171	-	-	-
31.2	99.7	GSM142636	MC002_ATH1_A5.2-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.7	99.7	GSM184500	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
26.3	99.7	GSM131629	ATGE_57_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
23.2	99.6	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
22.2	99.6	GSM142662	MB002_ATH1_A2-Eland-ch2	GSE6153	Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
21.8	99.6	GSM142661	MB002_ATH1_A1-Eland-ch1	GSE6153	Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
21.5	99.6	GSM131628	ATGE_57_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
21.4	99.6	GSM131673	ATGE_49_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
21.1	99.6	GSM131627	ATGE_57_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
20.3	99.6	GSM184494	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.6	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.4	99.5	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.3	99.5	ArrayExpress	E-MEXP-265-raw-cel-414617783	-	-	-
17.8	99.5	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
17.5	99.5	ArrayExpress	E-MEXP-728-raw-cel-1062073825	-	-	-
17.3	99.5	GSM131625	ATGE_56_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.3	99.5	ArrayExpress	E-MEXP-1246-raw-cel-1504120231	-	-	-
17.0	99.5	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.0	99.5	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.8	99.5	GSM131624	ATGE_56_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.7	99.5	GSM131626	ATGE_56_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.5	99.5	ArrayExpress	E-MEXP-1304-raw-cel-1530618033	-	-	-
16.4	99.5	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.2	99.5	GSM62697	Columbia_stem	GSE2848	Auxin Response Factor mediated flower gene expression
16.1	99.5	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.1	99.5	GSM62702	arf6 arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
15.8	99.5	GSM131845	Pracharoenwattana_1-2_mdhB_Rep2_ATH1	GSE5641	Peroxisomal mdh mutant
15.4	99.5	GSM142624	MC002_ATH1_A1.2-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
15.4	99.5	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
15.1	99.4	ArrayExpress	E-MEXP-265-raw-cel-414617890	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-1246-raw-cel-1504120201	-	-	-
14.0	99.4	ArrayExpress	E-MEXP-265-raw-cel-414617695	-	-	-
14.0	99.4	GSM142631	MC002_ATH1_A3.3-dubos-6kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.8	99.4	GSM62699	arf6/arf6 ARF8/arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
13.6	99.4	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.3	99.4	ArrayExpress	E-MEXP-728-raw-cel-1062073942	-	-	-
13.2	99.4	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
13.2	99.4	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.8	99.3	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.7	99.3	GSM62703	arf6 arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
12.5	99.3	ArrayExpress	E-MEXP-1246-raw-cel-1504120291	-	-	-
12.5	99.3	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.4	99.3	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.3	99.3	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
11.9	99.3	GSM131848	Pracharoenwattana_1-5_ColB_Rep2_ATH1	GSE5641	Peroxisomal mdh mutant
11.8	99.3	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.8	99.3	ArrayExpress	E-MEXP-728-raw-cel-1062073561	-	-	-
11.8	99.3	ArrayExpress	E-MEXP-475-raw-cel-680982377	-	-	-
11.7	99.3	GSM131675	ATGE_49_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.7	99.3	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.7	99.3	ArrayExpress	E-MEXP-1304-raw-cel-1530617935	-	-	-
11.5	99.3	GSM131634	ATGE_59_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.2	99.2	GSM131676	ATGE_50_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.1	99.2	GSM131635	ATGE_59_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.0	99.2	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.9	99.2	GSM62700	arf6/arf6 ARF8/arf8 flowers_stage 13-14	GSE2848	Auxin Response Factor mediated flower gene expression
10.5	99.2	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.5	99.2	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.5	99.2	ArrayExpress	E-MEXP-849-raw-cel-1181980894	-	-	-
10.4	99.2	ArrayExpress	E-MEXP-728-raw-cel-1062073408	-	-	-
10.4	99.2	GSM62701	arf6/arf6 ARF8/arf8_stem	GSE2848	Auxin Response Factor mediated flower gene expression
10.0	99.2	GSM131677	ATGE_50_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.9	99.1	GSM131678	ATGE_50_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.9	99.1	GSM184495	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.8	99.1	ArrayExpress	E-TABM-63-raw-cel-681136797	-	-	-
9.7	99.1	ArrayExpress	E-MEXP-728-raw-cel-1062073688	-	-	-
9.6	99.1	GSM131633	ATGE_59_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.5	99.1	GSM142639	MC002_ATH1_A6.2-dubos-5kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.4	99.1	GSM67079	Arabidopsis_Ovary02	GSE3056	Arabidopsis Pollination Study
9.4	99.1	ArrayExpress	E-MEXP-849-raw-cel-1181980886	-	-	-
9.4	99.1	GSM142623	MC002_ATH1_A1.1-dubos-wtx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.4	99.1	GSM131674	ATGE_49_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
9.2	99.1	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.2	99.1	GSM142637	MC002_ATH1_A5.3-dubos-5kx	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.1	99.1	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.1	99.1	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.0	99.1	ArrayExpress	E-TABM-63-raw-cel-681137264	-	-	-
9.0	99.1	GSM62698	arf6/arf6 ARF8/arf8 flowers_stage 1-10	GSE2848	Auxin Response Factor mediated flower gene expression
9.0	99.1	GSM109115	vte2-1(Col-0) 1 day, biological rep3	GSE4847	Expression data from tocopherol deficient seedlings of Arabidopsis
8.9	99.0	GSM142652	MC002_ATH1_A10.3-dubos-wth	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.9	99.0	ArrayExpress	E-ATMX-24-raw-cel-1441078106	-	-	-
8.8	99.0	GSM131654	ATGE_8_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.8	99.0	GSM245238	0hr DEX Replicate 3	GSE9702	Identification of putative targets of AP3/PI
8.7	99.0	ArrayExpress	E-TABM-19-raw-cel-489757236	-	-	-
8.7	99.0	GSM133944	Weigel_2-36_CHIP-214_D_Rep3_ATH1	GSE5746	FRI FLC combos
8.6	99.0	ArrayExpress	E-ATMX-24-raw-cel-1441078124	-	-	-
8.6	99.0	GSM266675	Arabidopsis, root cells, stele, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
8.6	99.0	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
8.6	99.0	ArrayExpress	E-MEXP-1246-raw-cel-1504120261	-	-	-
8.6	99.0	GSM253193	RGA-GR-MOCK-REP1	GSE10019	Identification of RGA downstream genes by using steroid-inducible system

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