Specifically-expressed experiments

Gene ID At3g60420
Gene name -
Functional description F:unknown;P:unknown;C:cellular_component unknown;OBFPM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
96.399.9GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
76.299.9GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
75.499.9GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
71.199.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
66.799.8GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
65.199.8ArrayExpressE-MEXP-807-raw-cel-1173272921---
64.599.8ArrayExpressE-ATMX-25-raw-cel-1441077482---
59.499.8ArrayExpressE-ATMX-25-raw-cel-1441077500---
51.399.8ArrayExpressE-ATMX-25-raw-cel-1441077517---
50.099.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
47.099.8GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
45.499.8ArrayExpressE-MEXP-807-raw-cel-1173273032---
42.199.8GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
42.099.8GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
40.999.8ArrayExpressE-MEXP-546-raw-cel-863289586---
38.199.8GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
35.099.7GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
34.699.7GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
34.199.7GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
32.199.7GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
31.399.7GSM1330372508GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
30.899.7GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
29.199.7GSM269497mkk1/mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
28.899.7GSM269499mkk1/mkk2, 24h after BTH, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
27.699.7GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
27.399.7GSM269494mkk1/mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
27.299.7GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.599.7ArrayExpressE-MEXP-807-raw-cel-1173272864---
25.799.7GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
25.299.6GSM134441St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
25.099.6GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
24.899.6ArrayExpressE-ATMX-27-raw-cel-1441080684---
24.799.6GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
24.399.6ArrayExpressE-MEXP-807-raw-cel-1173273088---
23.999.6GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
23.299.6GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
23.299.6GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
22.999.6GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
22.999.6GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
22.199.6GSM269498mkk1/mkk2, 24h after BTH, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
21.799.6ArrayExpressE-MEXP-807-raw-cel-1173273196---
21.799.6GSM269496mkk1/mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
21.499.6GSM134440St.Clair_1-65_322_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
21.299.6GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
20.899.6GSM134422St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
20.799.6GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
20.399.6ArrayExpressE-ATMX-27-raw-cel-1441080652---
20.199.6ArrayExpressE-MEXP-174-raw-cel-357966668---
19.899.6GSM1330642528GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
19.399.6ArrayExpressE-ATMX-34-raw-cel-1563627275---
19.099.5GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.899.5ArrayExpressE-MEXP-174-raw-cel-357966634---
18.699.5GSM134404St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
18.599.5GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
18.599.5GSM1330632526GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
18.499.5GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.399.5ArrayExpressE-MEXP-807-raw-cel-1173272894---
18.299.5GSM264762Tween 0.1% 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
17.799.5GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
17.799.5GSM1330462788GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
17.499.5GSM134403St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
17.399.5ArrayExpressE-TABM-126-raw-cel-1242543401---
17.299.5GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.999.5GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
16.699.5GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
16.599.5GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
16.599.5ArrayExpressE-MEXP-173-raw-cel-357965520---
16.399.5GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
16.399.5ArrayExpressE-ATMX-27-raw-cel-1441080668---
15.899.5GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
15.899.5ArrayExpressE-MEXP-546-raw-cel-863289424---
15.599.5GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
15.499.5GSM1330582506GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
15.399.4GSM134439St.Clair_1-64_270b_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
15.299.4GSM1330502791GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
15.099.4GSM264764paraquat 20mM 1hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
15.099.4ArrayExpressE-MEXP-807-raw-cel-1173272832---
14.999.4ArrayExpressE-ATMX-27-raw-cel-1441080508---
14.999.4ArrayExpressE-MEXP-174-raw-cel-357966600---
14.799.4GSM1330512793GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
14.799.4ArrayExpressE-ATMX-27-raw-cel-1441080540---
14.599.4GSM131065Hammond_2-6_pho1mutant_Rep3_ATH1GSE5611Differential gene expression patterns in the phosphate deficient mutant, pho 1Link to GEO
14.399.4ArrayExpressE-MEXP-807-raw-cel-1173273005---
14.099.4ArrayExpressE-MEXP-807-raw-cel-1173273170---
14.099.4ArrayExpressE-ATMX-34-raw-cel-1563627284---
14.099.4GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.999.4GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
13.899.4ArrayExpressE-MEXP-739-raw-cel-1099467330---
13.899.4GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.899.4GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.699.4GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.599.4ArrayExpressE-MEXP-807-raw-cel-1173273116---
13.499.4GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.499.4GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
13.399.4GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.299.4GSM264766paraquat 20mM 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
12.999.3ArrayExpressE-MEXP-739-raw-cel-1099467303---
12.999.3ArrayExpressE-TABM-52-raw-cel-1583682926---
12.699.3GSM1330412525GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
12.699.3GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
12.699.3ArrayExpressE-MEXP-739-raw-cel-1099467294---
12.399.3GSM142876GW001_ATH1_A21-Warre-00fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
12.199.3GSM264761Tween 0.1% 1hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
12.099.3GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
12.099.3ArrayExpressE-MEXP-807-raw-cel-1173273060---
11.999.3GSM264765paraquat 20mM 2hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
11.799.3ArrayExpressE-MEXP-739-raw-cel-1099467339---
11.599.3GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
11.399.3GSM7718200h pgm (Col-0) mutant replicate BGSE3424Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0)Link to GEO
10.999.2GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
10.899.2GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2ArrayExpressE-MEXP-173-raw-cel-357965486---
10.699.2GSM1330542796GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.699.2ArrayExpressE-MEXP-739-raw-cel-1099467312---
10.599.2ArrayExpressE-MEXP-739-raw-cel-1099467249---
10.499.2ArrayExpressE-TABM-126-raw-cel-1242542489---
10.299.2GSM142879GW001_ATH1_A24-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
10.199.2ArrayExpressE-MEXP-739-raw-cel-1099467321---
10.099.2GSM269491mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
9.899.1ArrayExpressE-TABM-126-raw-cel-1242543305---
9.899.1ArrayExpressE-TABM-62-raw-cel-720980182---
9.899.1ArrayExpressE-MEXP-711-raw-cel-1563002902---
9.799.1GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.799.1GSM142881GW001_ATH1_A26-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.699.1ArrayExpressE-TABM-62-raw-cel-720975550---
9.699.1GSM142880GW001_ATH1_A25-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.499.1GSM142878GW001_ATH1_A23-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.399.1GSM134414St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
9.299.1GSM134394St.Clair_1-91_267b_Tsu-1_0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
9.299.1ArrayExpressE-MEXP-807-raw-cel-1173272977---
9.299.1ArrayExpressE-MEXP-546-raw-cel-863289404---
9.299.1GSM134396St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
9.199.1GSM1330532794GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.099.1GSM142877GW001_ATH1_A22-Warre-00fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
8.999.0ArrayExpressE-MEXP-807-raw-cel-1173273223---
8.999.0GSM157312Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
8.899.0GSM1330612511GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
8.899.0GSM1330652529GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage