Specifically-expressed experiments

Gene ID	At3g59060
Gene name	PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)
Functional description	Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
28.8	99.7	GSM244443	Arabidopsis wild-type_T0 (not inoculated)_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
28.2	99.7	GSM253159	4h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
27.6	99.7	GSM253158	4h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
25.4	99.6	GSM77180	04h low CO2 + dark replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
23.9	99.6	GSM253160	6h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
22.9	99.6	GSM77177	04h low CO2 + dark replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
21.8	99.6	ArrayExpress	E-ATMX-30-raw-cel-1513696675	-	-	-
19.8	99.6	GSM268247	WT-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
18.0	99.5	GSM253161	8h into an extended nightA	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
17.1	99.5	GSM253162	8h into an extended nightB	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
17.1	99.5	ArrayExpress	E-MEXP-98-raw-cel-320188804	-	-	-
16.6	99.5	GSM38668	NSNP	GSE2268	Arabidopsis polysome microarray
14.9	99.4	GSM128649	Underwood_1-2_Cor-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.3	99.4	GSM244451	Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
13.1	99.4	ArrayExpress	E-ATMX-30-raw-cel-1513696930	-	-	-
12.9	99.3	ArrayExpress	E-MEXP-1094-raw-cel-1379507473	-	-	-
12.8	99.3	ArrayExpress	E-MEXP-1094-raw-cel-1379507433	-	-	-
12.6	99.3	GSM131231	AtGen_6-0111_Control-Shoots-0.5h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
11.9	99.3	GSM244446	Arabidopsis wild-type_2-4 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
11.8	99.3	GSM94008	A1-1 second repeat	GSE4113	Arabidopsis plants with altered levels of alternative oxidase
11.6	99.3	GSM131359	AtGen_6-5111_Genotoxicstress-Shoots-0.5h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
11.6	99.3	GSM128648	Underwood_1-1_Cor-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.4	99.3	GSM128650	Underwood_1-3_Cor-10e6-24h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.4	99.3	GSM131284	AtGen_6-2112_Osmoticstress-Shoots-0.5h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
11.3	99.3	ArrayExpress	E-MEXP-98-raw-cel-320189024	-	-	-
11.3	99.3	GSM244452	Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
11.3	99.3	GSM131360	AtGen_6-5112_Genotoxicstress-Shoots-0.5h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
11.1	99.2	GSM128652	Underwood_1-5_Cor-hrpS-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.9	99.2	GSM131308	AtGen_6-3112_Saltstress-Shoots-0.5h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
10.9	99.2	ArrayExpress	E-MEXP-1094-raw-cel-1379507193	-	-	-
10.8	99.2	GSM128651	Underwood_1-4_Cor-hrpS-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.8	99.2	ArrayExpress	E-MEXP-1454-raw-cel-1585858181	-	-	-
10.4	99.2	ArrayExpress	E-ATMX-30-raw-cel-1513696731	-	-	-
10.4	99.2	GSM244445	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.4	99.2	GSM131227	AtGen_6-0711_Control-Shoots-0.25h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.4	99.2	GSM244456	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.2	99.2	GSM244458	Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.1	99.2	GSM133400	Knight_2-3_sfr6-lt_Rep1_ATH1	GSE5710	Dark-induced gene expression in sfr6
10.1	99.2	GSM244453	Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.0	99.2	ArrayExpress	E-MEXP-1094-raw-cel-1379507353	-	-	-
10.0	99.2	GSM244450	Arabidopsis AtMYB30-ox_T0 (not inoculated)_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
9.9	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519903848	-	-	-
9.9	99.1	GSM131340	AtGen_6-4212_Droughtstress-Shoots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.8	99.1	GSM244444	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
9.8	99.1	ArrayExpress	E-MEXP-1094-raw-cel-1379507233	-	-	-
9.7	99.1	GSM38670	DSNP	GSE2268	Arabidopsis polysome microarray
9.6	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467402	-	-	-
9.6	99.1	GSM131228	AtGen_6-0712_Control-Shoots-0.25h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.5	99.1	GSM131379	AtGen_6-5611_Genotoxicstress-Shoots-24.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
9.5	99.1	ArrayExpress	E-MEXP-1454-raw-cel-1585858399	-	-	-
9.4	99.1	GSM253157	2h into an extended night	GSE10016	Expression data of Arabidopsis thaliana rosettes in an extended night
9.4	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467419	-	-	-
9.4	99.1	ArrayExpress	E-ATMX-30-raw-cel-1513696778	-	-	-
9.3	99.1	GSM237292	Shoot control rep1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
9.2	99.1	ArrayExpress	E-MEXP-1094-raw-cel-1379507113	-	-	-
9.2	99.1	ArrayExpress	E-MEXP-1454-raw-cel-1585858145	-	-	-
9.1	99.1	GSM131232	AtGen_6-0112_Control-Shoots-0.5h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.1	99.1	ArrayExpress	E-MEXP-1454-raw-cel-1585858071	-	-	-
9.0	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467487	-	-	-
8.9	99.0	GSM131411	AtGen_6-8715_Woundingstress-Shoots-0.25h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)

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