Specifically-expressed experiments

Gene ID At3g57460
Gene name catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding
Functional description F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
373.0100.0ArrayExpressE-MEXP-807-raw-cel-1173273060---
327.0100.0ArrayExpressE-MEXP-807-raw-cel-1173273116---
255.2100.0ArrayExpressE-MEXP-807-raw-cel-1173273252---
212.9100.0ArrayExpressE-MEXP-807-raw-cel-1173273223---
204.9100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
181.3100.0ArrayExpressE-MEXP-807-raw-cel-1173273170---
171.4100.0ArrayExpressE-MEXP-807-raw-cel-1173273088---
141.399.9ArrayExpressE-MEXP-807-raw-cel-1173273144---
123.599.9GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
120.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
104.099.9GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
95.999.9ArrayExpressE-MEXP-546-raw-cel-863289586---
90.799.9GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
85.199.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
75.699.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
74.699.9GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
68.599.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
65.199.8ArrayExpressE-MEXP-807-raw-cel-1173273196---
50.699.8GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
48.299.8GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
48.199.8ArrayExpressE-MEXP-509-raw-cel-829148666---
40.999.8GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
40.199.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
32.899.7GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
29.199.7GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
28.799.7GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
25.199.6GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
24.699.6GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
23.699.6GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
21.599.6GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
20.899.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
20.399.6ArrayExpressE-MEXP-711-raw-cel-1563002768---
20.099.6GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.999.6GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.999.5ArrayExpressE-MEXP-711-raw-cel-1563002733---
18.999.5GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
17.699.5GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
16.999.5GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
16.599.5GSM269498mkk1/mkk2, 24h after BTH, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
15.899.5GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.499.5GSM269499mkk1/mkk2, 24h after BTH, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
15.499.5GSM269496mkk1/mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
15.299.4GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.499.4GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
13.999.4GSM157375Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
13.999.4ArrayExpressE-MEXP-509-raw-cel-829148090---
13.399.4GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
12.899.3GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.499.3ArrayExpressE-MEXP-174-raw-cel-357966600---
12.499.3GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
12.299.3GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.699.3GSM133904Yang_1-9_CPR5SCV1-1_Rep1_ATH1GSE5745Mutant arrayLink to GEO
11.599.3GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
11.499.3ArrayExpressE-MEXP-509-raw-cel-829148385---
11.299.2GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.199.2GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.199.2GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
10.799.2GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.699.2GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.599.2GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
10.499.2ArrayExpressE-MEXP-174-raw-cel-357966668---
10.199.2ArrayExpressE-MEXP-807-raw-cel-1173272921---
10.099.2ArrayExpressE-MEXP-509-raw-cel-829148420---
9.899.1ArrayExpressE-MEXP-546-raw-cel-863289404---
9.699.1GSM142800SS001_ATH1_A3-Smith-23GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
9.699.1GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
9.499.1GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.499.1ArrayExpressE-MEXP-98-raw-cel-320189079---
9.399.1GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
9.199.1ArrayExpressE-MEXP-711-raw-cel-1563002839---
9.199.1ArrayExpressE-MEXP-711-raw-cel-1563002803---
9.099.1GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.899.0GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
8.799.0GSM142895MW001_ATH1_A3-Wheel-a14_repeatGSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO



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