Specifically-expressed experiments

Gene ID	At3g54940
Gene name	-
Functional description	-

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
140.5	99.9	GSM10456	WT Post-Mature Green Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
133.1	99.9	GSM10454	WT Post-Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
124.9	99.9	GSM131708	ATGE_84_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
120.4	99.9	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
119.3	99.9	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
118.1	99.9	GSM153927	ahg1-1 rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
114.5	99.9	GSM131707	ATGE_84_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
113.2	99.9	GSM133759	Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
109.7	99.9	GSM134312	Penfield_1-14_embryo-ABA_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
108.2	99.9	GSM10483	lec1-1 Post-Mature Green Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
105.8	99.9	ArrayExpress	E-ATMX-1-raw-cel-1112746267	-	-	-
102.8	99.9	GSM131706	ATGE_84_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
93.4	99.9	ArrayExpress	E-MEXP-849-raw-cel-1181980982	-	-	-
92.7	99.9	GSM131703	ATGE_83_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
92.4	99.9	GSM10451	WT Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
92.2	99.9	GSM131704	ATGE_83_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
91.5	99.9	GSM131705	ATGE_83_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
88.8	99.9	GSM153926	ahg1-1 rep1	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
86.1	99.9	GSM131700	ATGE_82_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
85.9	99.9	GSM153928	ahg3-1 rep1	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
85.0	99.9	GSM131701	ATGE_82_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
81.7	99.9	GSM134303	Penfield_1-5_endosperm-ABA_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
80.6	99.9	GSM133312	RIKEN-LI1B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
77.7	99.9	GSM131702	ATGE_82_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
76.0	99.9	GSM133316	RIKEN-LI3B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
73.6	99.9	GSM153929	ahg3-1 rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
72.1	99.9	GSM153925	ABA control rep2	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
69.8	99.9	GSM133118	RIKEN-YAMAUCHI1B	GSE5687	AtGenExpress: Different temperature treatment of seeds
69.1	99.9	ArrayExpress	E-ATMX-1-raw-cel-1112746209	-	-	-
68.2	99.9	GSM133318	RIKEN-LI4B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
68.2	99.9	ArrayExpress	E-ATMX-1-raw-cel-1112746095	-	-	-
68.2	99.9	GSM134304	Penfield_1-6_endosperm-ABA_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
67.8	99.9	GSM133320	RIKEN-LI5B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
67.4	99.8	GSM10484	lec1-1 Post-Mature Green Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
65.5	99.8	GSM133315	RIKEN-LI3A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
59.9	99.8	GSM134302	Penfield_1-4_endosperm-ABA_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
55.2	99.8	GSM134315	Penfield_1-17_embryo-PAC_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
54.8	99.8	GSM10453	WT Mature Green Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
54.1	99.8	GSM133314	RIKEN-LI2B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
53.4	99.8	GSM133311	RIKEN-LI1A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
53.2	99.8	ArrayExpress	E-ATMX-1-raw-cel-1112746154	-	-	-
53.0	99.8	GSM133313	RIKEN-LI2A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
52.4	99.8	GSM134313	Penfield_1-15_embryo-ABA_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
49.7	99.8	GSM134316	Penfield_1-18_embryo-PAC_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
48.6	99.8	ArrayExpress	E-MEXP-849-raw-cel-1181980990	-	-	-
47.8	99.8	GSM134311	Penfield_1-13_embryo-ABA_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
47.0	99.8	GSM133319	RIKEN-LI5A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
46.6	99.8	GSM133317	RIKEN-LI4A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
44.4	99.8	ArrayExpress	E-MEXP-849-raw-cel-1181980998	-	-	-
43.6	99.8	GSM134314	Penfield_1-16_embryo-PAC_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
43.0	99.8	GSM133774	Lindsey_1-26_torpedo-meristem_Rep2_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
37.3	99.7	GSM305282	estradiol induced, biological replicate 1	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
36.5	99.7	GSM133322	RIKEN-LI6B	GSE5701	AtGenExpress: Basic hormone treatment of seeds
34.5	99.7	GSM131698	ATGE_81_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
34.3	99.7	GSM131699	ATGE_81_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
33.8	99.7	ArrayExpress	E-MEXP-849-raw-cel-1181981006	-	-	-
33.3	99.7	GSM131697	ATGE_81_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
31.7	99.7	GSM133309	RIKEN-NAKABAYASHI4B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
30.7	99.7	GSM10482	lec1-1 Mature Green Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
30.7	99.7	GSM133308	RIKEN-NAKABAYASHI4A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
30.5	99.7	GSM133310	RIKEN-NAKABAYASHI5B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
30.3	99.7	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
27.8	99.7	GSM131695	ATGE_79_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
27.4	99.7	GSM131696	ATGE_79_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
26.6	99.7	GSM133307	RIKEN-NAKABAYASHI3A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
26.5	99.7	GSM133321	RIKEN-LI6A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
26.0	99.7	GSM131694	ATGE_79_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
24.9	99.6	GSM134307	Penfield_1-9_endosperm-PAC_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
22.3	99.6	GSM311267	Ws seedlings, biological rep2	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
21.9	99.6	GSM153924	ABA control rep1	GSE6638	Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
20.9	99.6	GSM133306	RIKEN-NAKABAYASHI2B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
20.6	99.6	GSM10481	lec1-1 Mature Green Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
20.4	99.6	GSM133120	RIKEN-YAMAUCHI2B	GSE5687	AtGenExpress: Different temperature treatment of seeds
19.2	99.6	ArrayExpress	E-MEXP-849-raw-cel-1181981014	-	-	-
18.6	99.5	GSM128746	Edwards_3-2_fri-flc1_Rep1_ATH1	GSE5528	Identifying targets of FLC at 27oC
18.2	99.5	ArrayExpress	E-MEXP-849-raw-cel-1181981030	-	-	-
17.9	99.5	GSM133305	RIKEN-NAKABAYASHI2A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
16.8	99.5	GSM299408	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
15.3	99.4	GSM299341	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 3 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
14.4	99.4	GSM128748	Edwards_3-4_fri-flc2_Rep2_ATH1	GSE5528	Identifying targets of FLC at 27oC
14.2	99.4	GSM139880	eif3h_non-polysome_rep1	GSE6024	eif3h/WT polysome loading
14.2	99.4	GSM299410	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
13.6	99.4	GSM305284	estradiol induced, biological replicate 2	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
12.7	99.3	GSM299340	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 2 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.6	99.3	GSM299409	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
12.5	99.3	GSM311268	Ws seedlings, biological rep3	GSE12401	Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant
11.8	99.3	GSM299339	pkl Mutant Germinating Seeds With Uniconazole Treatment Set 1 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
11.7	99.3	GSM299337	Wild Type Germinating Seeds With Uniconazole Treatment Set 5 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
11.2	99.2	GSM299334	Wild Type Germinating Seeds With Uniconazole Treatment Set 2 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
11.0	99.2	GSM134306	Penfield_1-8_endosperm-PAC_Rep2_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
10.8	99.2	GSM299336	Wild Type Germinating Seeds With Uniconazole Treatment Set 4 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds
9.9	99.1	GSM133119	RIKEN-YAMAUCHI2A	GSE5687	AtGenExpress: Different temperature treatment of seeds
9.0	99.1	GSM299338	Wild Type Germinating Seeds With Uniconazole Treatment Set 6 of 6	GSE11852	Effect of uniconazole on wt and pkl mutant germinating seeds

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