Specifically-expressed experiments

Gene ID	At3g54590
Gene name	ATHRGP1 (HYDROXYPROLINE-RICH GLYCOPROTEIN)
Functional description	Encodes a hydroxyproline-rich glycoprotein.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
95.4	99.9	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
81.9	99.9	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
75.6	99.9	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
66.5	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
65.1	99.8	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
57.8	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
57.3	99.8	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
56.4	99.8	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
54.8	99.8	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
48.7	99.8	GSM157306	Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
48.7	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
46.6	99.8	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
44.5	99.8	GSM157338	Coates_1-10_ara1OX_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
42.9	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
42.3	99.8	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
40.3	99.8	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
39.9	99.8	GSM133264	RIKEN-GODA3B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
37.4	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243239	-	-	-
37.3	99.7	GSM142730	CH001_ATH1_A009-Hampt-wsc_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
36.4	99.7	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
35.4	99.7	GSM157305	Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
35.3	99.7	GSM133275	RIKEN-GODA9A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
35.1	99.7	GSM133265	RIKEN-GODA4A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
35.0	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243048	-	-	-
34.9	99.7	GSM133894	Schroeder_1-12_JS44-starve-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
34.0	99.7	ArrayExpress	Cornah_1-15_msc_Rep3_ATH1	-	-	-
33.1	99.7	GSM133252	RIKEN-GODA10B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
32.3	99.7	GSM133270	RIKEN-GODA6B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
32.0	99.7	GSM133284	RIKEN-GODA4B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
31.9	99.7	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
31.7	99.7	GSM133258	RIKEN-GODA13B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
31.6	99.7	GSM133259	RIKEN-GODA1A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
31.0	99.7	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
30.7	99.7	GSM157334	Coates_1-6_ara1OX_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
30.7	99.7	GSM133272	RIKEN-GODA7B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
30.7	99.7	GSM133262	RIKEN-GODA2B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
30.4	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
30.3	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243390	-	-	-
29.5	99.7	GSM133256	RIKEN-GODA12B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
29.2	99.7	ArrayExpress	Cornah_1-14_msc_Rep2_ATH1	-	-	-
28.6	99.7	GSM133773	Lindsey_1-25_torpedo-meristem_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
27.4	99.7	GSM133268	RIKEN-GODA5B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
27.2	99.7	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
26.9	99.7	GSM133276	RIKEN-GODA9B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
26.6	99.7	GSM133282	RIKEN-GODA3B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
26.2	99.7	GSM133135	S1500_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
26.0	99.7	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
25.9	99.7	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
25.3	99.6	GSM133254	RIKEN-GODA11B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
25.1	99.6	GSM133273	RIKEN-GODA8A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
24.8	99.6	GSM133274	RIKEN-GODA8B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
24.8	99.6	GSM133263	RIKEN-GODA3A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
24.3	99.6	GSM133260	RIKEN-GODA1B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
23.7	99.6	GSM133269	RIKEN-GODA6A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
23.7	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
23.6	99.6	GSM305283	control, biological replicate 2	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
22.6	99.6	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
22.5	99.6	GSM133253	RIKEN-GODA11A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
22.4	99.6	GSM133280	RIKEN-GODA2B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
22.4	99.6	GSM133261	RIKEN-GODA2A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
22.3	99.6	GSM133266	RIKEN-GODA4B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
22.2	99.6	GSM133278	RIKEN-GODA1B-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
22.2	99.6	ArrayExpress	Cornah_1-11_A3-msx_Rep3_ATH1	-	-	-
22.1	99.6	GSM157337	Coates_1-9_Col-0_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
22.0	99.6	GSM133283	RIKEN-GODA4A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
21.6	99.6	GSM133271	RIKEN-GODA7A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
21.6	99.6	GSM131567	ATGE_95_A	GSE5631	AtGenExpress: Developmental series (roots)
21.3	99.6	GSM133277	RIKEN-GODA1A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
21.3	99.6	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
21.2	99.6	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
20.8	99.6	GSM133251	RIKEN-GODA10A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
20.3	99.6	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
19.5	99.6	GSM133801	Werner_1-2_wildtype-24hr-control(c4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
19.1	99.6	GSM142731	CH001_ATH1_A010-Hampt-akc	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
19.1	99.6	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
19.0	99.5	ArrayExpress	Cornah_1-16_wtc_Rep1_ATH1	-	-	-
18.5	99.5	GSM142723	CH001_ATH1_A002-Hampt-aka	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
18.3	99.5	GSM142698	MH001_ATH1_A12-grevi-AT3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
18.3	99.5	GSM133279	RIKEN-GODA2A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
18.1	99.5	GSM133267	RIKEN-GODA5A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
18.1	99.5	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
17.9	99.5	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.7	99.5	GSM260880	Yap_A1-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
17.4	99.5	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.4	99.5	GSM133802	Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
17.4	99.5	ArrayExpress	Cornah_1-17_wtc_Rep2_ATH1	-	-	-
17.3	99.5	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
17.2	99.5	GSM142697	MH001_ATH1_A11-grevi-AT2	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
17.0	99.5	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
17.0	99.5	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
16.8	99.5	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
16.6	99.5	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
16.6	99.5	GSM142725	CH001_ATH1_A004-Hampt-c1a	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
16.5	99.5	GSM184933	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
15.9	99.5	GSM133130	S0_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
15.9	99.5	GSM133123	S0_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
15.9	99.5	ArrayExpress	E-MEXP-791-raw-cel-1122937578	-	-	-
15.9	99.5	GSM133257	RIKEN-GODA13A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
15.7	99.5	GSM133142	S1500_8H_B	GSE5688	AtGenExpress: Response to sulfate limitation
15.7	99.5	GSM184935	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
15.7	99.5	GSM184544	Whole roots 2hr KNO3 treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.7	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922416	-	-	-
15.7	99.5	GSM142733	CH001_ATH1_A012-Hampt-c1c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
15.6	99.5	GSM142695	MH001_ATH1_A9-grevi-CT3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
15.6	99.5	GSM142696	MH001_ATH1_A10-grevi-AT1	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
15.3	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937614	-	-	-
15.1	99.4	GSM133281	RIKEN-GODA3A-M	GSE5697	AtGenExpress: Comparison of plant hormone-related mutants
14.9	99.4	GSM133892	Schroeder_1-6_JS43-control-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
14.9	99.4	GSM237280	Root control rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
14.8	99.4	GSM133255	RIKEN-GODA12A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
14.4	99.4	GSM133141	S1500_8H_A	GSE5688	AtGenExpress: Response to sulfate limitation
14.1	99.4	GSM142693	MH001_ATH1_A7-grevi-CT1	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
14.0	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
13.9	99.4	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.8	99.4	GSM157332	Coates_1-4_ara1/2mut_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
13.4	99.4	GSM142674	SF002_ATH1_A5-Fille-WTnodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
13.4	99.4	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.3	99.4	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
13.3	99.4	GSM157333	Coates_1-5_Col-0_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
13.2	99.4	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.2	99.4	GSM142692	MH001_ATH1_A6-grevi-AC3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
13.1	99.4	GSM184934	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
13.0	99.4	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
12.9	99.3	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
12.9	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661573186	-	-	-
12.5	99.3	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
12.5	99.3	GSM142729	CH001_ATH1_A008-Hampt-c1b	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
12.4	99.3	GSM142732	CH001_ATH1_A011-Hampt-c4c	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
12.4	99.3	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
12.0	99.3	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.9	99.3	GSM133803	Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
11.8	99.3	GSM305284	estradiol induced, biological replicate 2	GSE12137	LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
11.5	99.3	GSM142726	CH001_ATH1_A005-Hampt-wsb_repeat	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.4	99.3	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.3	99.3	GSM133128	S0_4H_B	GSE5688	AtGenExpress: Response to sulfate limitation
11.3	99.3	GSM142727	CH001_ATH1_A006-Hampt-akb	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
11.1	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922659	-	-	-
11.1	99.2	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.7	99.2	GSM237281	Root control rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
10.7	99.2	ArrayExpress	Cornah_1-10_A2-irv_Rep3_ATH1	-	-	-
10.6	99.2	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.5	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661573160	-	-	-
10.5	99.2	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.4	99.2	GSM133800	Werner_1-1_wildtype-2hr-control(c2s)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
10.3	99.2	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.2	99.2	GSM48130	Col_Mock3	GSE2538	Chitin Oligomer Experiment
10.0	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661573173	-	-	-
10.0	99.2	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.9	99.1	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.8	99.1	GSM48122	Col_8mer1	GSE2538	Chitin Oligomer Experiment
9.7	99.1	GSM142670	SF002_ATH1_A8-Fille-ANGR4-12+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.7	99.1	GSM48129	Col_Mock2	GSE2538	Chitin Oligomer Experiment
9.7	99.1	GSM142721	CH001_ATH1_A001-Hampt-wsa	GSE6161	Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
9.5	99.1	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
9.3	99.1	GSM157314	Hammond_3-4_Control-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
9.3	99.1	GSM133136	S1500_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.3	99.1	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
9.1	99.1	ArrayExpress	E-MEXP-1784-raw-cel-1661572930	-	-	-
8.9	99.0	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
8.7	99.0	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.6	99.0	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
8.6	99.0	GSM133126	S0_2H_B	GSE5688	AtGenExpress: Response to sulfate limitation

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