Specifically-expressed experiments

Gene ID At3g54500
Gene name -
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
76.199.9ArrayExpressE-MEXP-1443-raw-cel-1581869515---
59.999.8GSM38668NSNPGSE2268Arabidopsis polysome microarrayLink to GEO
51.499.8ArrayExpressE-MEXP-1443-raw-cel-1581869573---
40.199.8GSM184151ATR1_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
36.299.7GSM318625Apex_octa_18DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
34.199.7GSM318618Apex_Col_14DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
33.099.7ArrayExpressE-ATMX-33-raw-cel-1562596264---
31.399.7GSM318345ML_35DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
30.999.7GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
30.199.7GSM318620Apex_mir-3TCP_14DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
29.499.7GSM318622Apex_mir-319b_17DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
28.199.7ArrayExpressE-ATMX-33-raw-cel-1562596288---
26.499.7GSM318621Apex_mir-3TCP_14DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
24.999.6GSM318627Apex_BLS>>TCP4_14DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
24.699.6GSM318619Apex_Col_14DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
23.499.6GSM2531572h into an extended nightGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
22.899.6GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
22.899.6GSM142815SS002_ATH1_A7-smith-13hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
21.399.6GSM2531584h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
20.899.6GSM183514MYB29_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
20.799.6GSM134777Col-0_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
20.799.6GSM318332ML_35DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
20.799.6GSM128657Underwood_1-10_Mock-Inoculum-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
20.499.6GSM128650Underwood_1-3_Cor-10e6-24h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.599.6GSM128653Underwood_1-6_Cor-hrpS-10e6-24h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.399.6GSM134775Col-0_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
18.999.5GSM128651Underwood_1-4_Cor-hrpS-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.499.5GSM128649Underwood_1-2_Cor-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.999.5GSM318623Apex_mir-319b_17DAS_2GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
17.899.5GSM131363AtGen_6-5211_Genotoxicstress-Shoots-1.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
17.899.5GSM139895WT_non-polysome_rep1GSE6024eif3h/WT polysome loadingLink to GEO
17.799.5GSM142814SS002_ATH1_A6-smith-12hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
17.199.5GSM183511MYB76_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
16.999.5GSM134782gun1-1_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
16.899.5GSM131359AtGen_6-5111_Genotoxicstress-Shoots-0.5h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.699.5GSM131364AtGen_6-5212_Genotoxicstress-Shoots-1.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.699.5GSM131379AtGen_6-5611_Genotoxicstress-Shoots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.599.5GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
16.499.5GSM183512MYB76_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
16.399.5GSM297382At.StarchSD.WTSS3.SS3R1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
16.399.5GSM128658Underwood_1-11_Mock-Inoculum-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.399.5GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
15.699.5GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.399.4GSM131443AtGen_6-9111_Heatstress-Shoots-0.5h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
15.299.4GSM128666Underwood_1-19_Mock-Inoculum-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.099.4GSM128718Pieterse_1-4_Control-72h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
14.799.4GSM134771abi4-102_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
14.599.4GSM142804SS001_ATH1_A7-Smith-10GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
14.299.4GSM131360AtGen_6-5112_Genotoxicstress-Shoots-0.5h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
14.099.4GSM128652Underwood_1-5_Cor-hrpS-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.999.4GSM131224AtGen_6-0012_Control-Shoots-0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
13.999.4GSM142805SS001_ATH1_A8-Smith-11GSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
13.899.4GSM131256AtGen_6-0612_Control-Shoots-24.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
13.899.4GSM131332AtGen_6-4712_Droughtstress-Shoots-0.25h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
13.699.4ArrayExpressE-ATMX-33-raw-cel-1562596310---
13.599.4GSM2531594h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
13.199.4GSM134769abi4-102_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
13.199.4GSM131255AtGen_6-0611_Control-Shoots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
13.199.4GSM131331AtGen_6-4711_Droughtstress-Shoots-0.25h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
13.199.4GSM62700arf6/arf6 ARF8/arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
13.099.4GSM253156end of the night CGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
12.999.3GSM134783gun1-1_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
12.999.3GSM131232AtGen_6-0112_Control-Shoots-0.5h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
12.699.3GSM62704arf6 arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
12.599.3GSM183516MYB51_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
12.599.3GSM131356AtGen_6-4612_Droughtstress-Shoots-24.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.499.3GSM244451Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
12.499.3GSM131355AtGen_6-4611_Droughtstress-Shoots-24.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
12.199.3GSM183513MYB29_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
12.199.3GSM297387At.StarchSD.WTSS3.SS3R2L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
12.099.3GSM94010Wild type third repeatGSE4113Arabidopsis plants with altered levels of alternative oxidaseLink to GEO
12.099.3GSM318330EL_14DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
12.099.3GSM318331EL_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
11.999.3GSM317519Apex_5DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
11.899.3GSM38670DSNPGSE2268Arabidopsis polysome microarrayLink to GEO
11.899.3GSM131444AtGen_6-9112_Heatstress-Shoots-0.5h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
11.899.3GSM244444Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
11.699.3GSM131408AtGen_6-7612_UV-Bstress-Shoots-24.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.699.3GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
11.599.3GSM131340AtGen_6-4212_Droughtstress-Shoots-1.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
11.599.3GSM131231AtGen_6-0111_Control-Shoots-0.5h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
11.399.3GSM128659Underwood_1-12_Mock-Inoculum-24h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.399.3GSM131307AtGen_6-3111_Saltstress-Shoots-0.5h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
11.399.3GSM131380AtGen_6-5612_Genotoxicstress-Shoots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
10.999.2GSM297392At.StarchSD.WTSS3.WTR1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycleLink to GEO
10.999.2ArrayExpressE-MEXP-1304-raw-cel-1530619734---
10.899.2GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.899.2GSM183506WT_for_MYB29/76_rep3GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
10.699.2GSM134772Col-0_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
10.699.2GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.599.2GSM183504WT_for_MYB29/76_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
10.599.2GSM131311AtGen_6-3211_Saltstress-Shoots-1.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.599.2GSM131223AtGen_6-0011_Control-Shoots-0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.499.2GSM131415AtGen_6-8111_Woundingstress-Shoots-0.5h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
10.399.2GSM244459Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.399.2GSM2531606h into an extended nightGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
10.399.2GSM131227AtGen_6-0711_Control-Shoots-0.25h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.299.2GSM134780gun1-1_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
10.199.2GSM131264AtGen_6-1212_Cold(4°C)-Shoots-1.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.999.1GSM317619Apex_14DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
9.999.1GSM131308AtGen_6-3112_Saltstress-Shoots-0.5h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.899.1GSM131771Quick_A96_1-48hr_Rep4_ATH1GSE5636Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)Link to GEO
9.799.1GSM131236AtGen_6-0212_Control-Shoots-1.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.699.1GSM94009A1-1 third repeatGSE4113Arabidopsis plants with altered levels of alternative oxidaseLink to GEO
9.599.1GSM131272AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.499.1ArrayExpressE-MEXP-185-raw-cel-358911662---
9.499.1GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.499.1GSM131753Quick_A18_1-48hr_Rep1_ATH1GSE5636Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)Link to GEO
9.499.1GSM131780Quick_A23_2-96hr_Rep1_ATH1GSE5637Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)Link to GEO
9.499.1GSM131825Quick_A98_3-48hr_Rep4_ATH1GSE5638Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)Link to GEO
9.399.1ArrayExpressE-MEXP-849-raw-cel-1181980902---
9.399.1GSM131228AtGen_6-0712_Control-Shoots-0.25h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.399.1GSM131235AtGen_6-0211_Control-Shoots-1.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.399.1GSM62703arf6 arf8 flowers_stage 11-12GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
9.299.1ArrayExpressE-MEXP-1304-raw-cel-1530620422---
9.299.1GSM131791Quick_A71_2-48hr_Rep3_ATH1GSE5637Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)Link to GEO
9.299.1ArrayExpressE-MEXP-1344-raw-cel-1559561683---
9.199.1GSM131407AtGen_6-7611_UV-Bstress-Shoots-24.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.199.1GSM128655Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.199.1GSM244443Arabidopsis wild-type_T0 (not inoculated)_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
9.199.1GSM131829Quick_A1_1-0hr_Rep1_ATH1GSE5639Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Controls)Link to GEO
9.099.1GSM131219Scrase-Field_1-3_Col-0-wildtype_Rep2_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
9.099.1ArrayExpressE-MEXP-1299-raw-cel-1519903415---
9.099.1GSM131288AtGen_6-2212_Osmoticstress-Shoots-1.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
8.999.0GSM134779gun1-1_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
8.999.0GSM317624Apex_14DAS_2GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
8.999.0GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
8.999.0ArrayExpressE-MEXP-1299-raw-cel-1519901564---
8.999.0ArrayExpressE-MEXP-185-raw-cel-358911774---
8.899.0GSM131268AtGen_6-1312_Cold(4°C)-Shoots-3.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
8.899.0GSM142663NE001_ATH1_A1-Evans-w20GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
8.899.0GSM131835Quick_A79_0-0hr_Rep4_ATH1GSE5639Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Controls)Link to GEO
8.799.0GSM131220Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
8.799.0GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
8.799.0ArrayExpressE-MEXP-849-raw-cel-1181980950---



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