Specifically-expressed experiments

Gene ID At3g54150
Gene name embryo-abundant protein-related
Functional description F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
165.6100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
137.599.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
133.699.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
98.799.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
73.799.9GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
73.699.9GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
65.499.8GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
63.099.8ArrayExpressE-NASC-76-raw-cel-1359879132---
62.599.8ArrayExpressE-MEXP-807-raw-cel-1173272948---
52.799.8ArrayExpressE-MEXP-1797-raw-cel-1669767940---
50.699.8GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
50.299.8GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
50.299.8ArrayExpressE-MEXP-711-raw-cel-1563002902---
48.399.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
47.899.8GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
47.299.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
46.099.8GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
42.099.8ArrayExpressE-MEXP-1797-raw-cel-1669768030---
41.199.8GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
41.099.8GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
38.199.8ArrayExpressE-MEXP-711-raw-cel-1563002768---
37.999.8ArrayExpressE-MEXP-98-raw-cel-320188859---
37.799.7GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
37.299.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
36.499.7GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
36.399.7ArrayExpressE-MEXP-1797-raw-cel-1669767967---
36.299.7GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
35.299.7ArrayExpressE-MEXP-807-raw-cel-1173273088---
33.799.7GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
33.799.7ArrayExpressE-NASC-76-raw-cel-1359879106---
32.599.7ArrayExpressE-ATMX-31-raw-cel-1516947916---
32.499.7ArrayExpressE-MEXP-807-raw-cel-1173273116---
30.799.7ArrayExpressE-MEXP-711-raw-cel-1563002839---
30.599.7ArrayExpressE-ATMX-31-raw-cel-1516947899---
30.499.7GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
30.099.7GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
29.399.7ArrayExpressE-MEXP-1797-raw-cel-1669767976---
28.999.7GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
28.899.7GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
27.999.7ArrayExpressE-MEXP-547-raw-cel-863346430---
27.199.7GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
26.999.7ArrayExpressE-NASC-76-raw-cel-1359879028---
26.999.7GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.899.7ArrayExpressE-MEXP-807-raw-cel-1173273032---
26.199.7ArrayExpressE-MEXP-711-raw-cel-1563002803---
25.799.7ArrayExpressE-NASC-76-raw-cel-1359878951---
25.699.7GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
25.699.7ArrayExpressE-MEXP-547-raw-cel-863346403---
25.299.6GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
24.799.6ArrayExpressE-MEXP-98-raw-cel-320189079---
24.699.6ArrayExpressE-MEXP-547-raw-cel-863346376---
24.399.6GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
24.299.6GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
24.199.6GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
24.199.6GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
23.799.6ArrayExpressE-MEXP-711-raw-cel-1563002733---
23.599.6GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
22.899.6ArrayExpressE-MEXP-1094-raw-cel-1379507273---
22.399.6GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
21.999.6GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.699.6GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
21.399.6GSM131161AtGen_C-11_2-Pi-6_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
20.999.6GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
20.599.6GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
19.499.6GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
19.299.6ArrayExpressE-ATMX-31-raw-cel-1516947882---
18.999.5ArrayExpressE-MEXP-807-raw-cel-1173273005---
17.899.5GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
17.899.5GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
17.699.5GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
17.499.5ArrayExpressE-MEXP-1797-raw-cel-1669767958---
17.499.5GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
17.399.5GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
17.199.5GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
16.999.5ArrayExpressE-MEXP-547-raw-cel-863346457---
16.899.5ArrayExpressE-MEXP-807-raw-cel-1173273196---
16.599.5GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.399.5ArrayExpressE-MEXP-807-raw-cel-1173272921---
16.299.5GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
15.999.5GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
15.599.5GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
15.399.4GSM142907WW002_ATH1_A2-willa-ISOX-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
15.199.4GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
14.799.4GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
14.399.4ArrayExpressE-MEXP-1797-raw-cel-1669768048---
14.399.4ArrayExpressE-MEXP-739-raw-cel-1099467240---
14.199.4GSM133812Diamond_A-1-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
13.999.4GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
13.899.4GSM226552Slice10JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
13.299.4ArrayExpressE-MEXP-546-raw-cel-863289404---
13.099.4GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
12.999.3ArrayExpressE-MEXP-174-raw-cel-357966600---
12.999.3GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
12.699.3GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.499.3GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
12.499.3ArrayExpressE-MEXP-807-raw-cel-1173273252---
12.399.3ArrayExpressE-MEXP-807-raw-cel-1173273144---
12.199.3GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
12.199.3GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.999.3ArrayExpressE-ATMX-28-raw-cel-1441104826---
11.899.3ArrayExpressE-MEXP-807-raw-cel-1173273223---
11.799.3GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
11.799.3ArrayExpressE-MEXP-739-raw-cel-1099467276---
11.699.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.599.3GSM142594DB001_ATH1_A4-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
11.499.3GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
10.999.2GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.899.2GSM131273AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
10.899.2ArrayExpressE-MEXP-1094-raw-cel-1379507313---
10.599.2ArrayExpressE-MEXP-807-raw-cel-1173273060---
10.599.2ArrayExpressE-MEXP-1797-raw-cel-1669768057---
10.499.2GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.399.2ArrayExpressE-MEXP-711-raw-cel-1563002698---
10.399.2GSM133295NO.32GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
10.399.2GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
10.299.2GSM48123Col_8mer2GSE2538Chitin Oligomer ExperimentLink to GEO
10.199.2GSM184526Stele root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.099.2GSM133296NO.33GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
9.899.1GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
9.899.1ArrayExpressE-MEXP-546-raw-cel-863289424---
9.799.1GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.699.1GSM131162AtGen_C-12_3-Pi-6_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
9.699.1GSM133294NO.31GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
9.699.1ArrayExpressE-MEXP-1443-raw-cel-1581869632---
9.599.1ArrayExpressE-MEXP-1797-raw-cel-1669768084---
9.599.1GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.499.1GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.399.1GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
9.199.1GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.199.1ArrayExpressE-MEXP-807-raw-cel-1173272832---
9.199.1GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
9.099.1GSM131274AtGen_6-1422_Cold(4°C)-Roots-6.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.099.1GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0ArrayExpressE-ATMX-28-raw-cel-1441104835---
8.899.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.799.0ArrayExpressE-MEXP-546-raw-cel-863289532---
8.699.0ArrayExpressE-MEXP-98-raw-cel-320189024---



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