Specifically-expressed experiments

Gene ID At3g50560
Gene name short-chain dehydrogenase/reductase (SDR) family protein
Functional description F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
225.8100.0GSM142664NE001_ATH1_A2-Evans-w30GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
190.3100.0GSM142667NE001_ATH1_A5-Evans-m30GSE6154Molecular basis of respiratory burst-mediated thermotolerance in ArabidopsisLink to GEO
83.199.9GSM142773AM002_ATH1_A8-MCCOR-GDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
82.299.9GSM311269ged1 seedlings, biological rep1GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
77.299.9GSM311270ged1 seedlings, biological rep2GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
63.399.8GSM142779AM002_ATH1_A4-MCCOR-GDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
49.799.8GSM142778AM002_ATH1_A3-MCCOR-GFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
49.399.8GSM142772AM002_ATH1_A7-MCCOR-GFBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
48.399.8GSM311271ged1 seedlings, biological rep3GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
39.199.8GSM142777AM002_ATH1_A2-MCCOR-WDAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
38.899.8GSM142781AM002_ATH1_A6-MCCOR-WDBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
36.999.7GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
34.999.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
34.399.7GSM133258RIKEN-GODA13B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
31.899.7GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
31.399.7GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
29.499.7GSM142775AM002_ATH1_A10-MCCOR-ADAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
28.599.7GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
28.599.7GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
23.399.6ArrayExpressE-MEXP-1112-raw-cel-1590665377---
23.099.6GSM133255RIKEN-GODA12A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
22.299.6ArrayExpressCornah_1-15_msc_Rep3_ATH1---
22.199.6GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
20.999.6GSM133256RIKEN-GODA12B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
19.699.6ArrayExpressE-ATMX-33-raw-cel-1562596264---
18.999.5GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6Link to GEO
18.899.5ArrayExpressE-MEXP-1299-raw-cel-1519903496---
18.399.5ArrayExpressE-MEXP-1299-raw-cel-1519901645---
18.199.5GSM244445Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
17.399.5GSM244459Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
16.999.5ArrayExpressCornah_1-14_msc_Rep2_ATH1---
16.899.5GSM133252RIKEN-GODA10B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
16.699.5GSM244444Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
16.599.5GSM128788Somerville_1-11_stem-GH8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
16.299.5GSM244451Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
15.399.4GSM133715Villadsen_A-5-villa-DOG_SLDGSE5723IdentificationOf genes responsive to non-metabolised glucose analogs: approach to hexokinase-independent glucose sensingLink to GEO
14.899.4GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.699.4GSM133273RIKEN-GODA8A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
14.599.4ArrayExpressE-MEXP-1112-raw-cel-1590665793---
14.199.4ArrayExpressCornah_1-16_wtc_Rep1_ATH1---
14.099.4GSM133251RIKEN-GODA10A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
13.699.4GSM142776AM002_ATH1_A1-MCCOR-WFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
13.299.4GSM133723McCormac_1-1_wildtype-NFtreated_Rep1_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
13.099.4GSM128688Helenius_1-1_control-non-treated_Rep1_ATH1GSE5521Comparative ABA-treatment of Col-O vector control and transgenic plantsLink to GEO
12.999.3ArrayExpressE-MEXP-1112-raw-cel-1590665429---
12.799.3GSM142774AM002_ATH1_A9-MCCOR-AFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.Link to GEO
12.699.3GSM109117wild-type(Col-0) 3 day, biological rep2GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
12.399.3GSM131447AtGen_6-9211_Heatstress-Shoots-1.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
12.299.3GSM109121vte1-1(Col-0) 3 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
12.299.3GSM142691MH001_ATH1_A5-grevi-AC2GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
11.899.3GSM109116wild-type(Col-0) 3 day, biological rep1GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
11.899.3GSM244457Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
11.699.3GSM128690Helenius_1-3_ERD15-oex-non-treated_Rep1_ATH1GSE5521Comparative ABA-treatment of Col-O vector control and transgenic plantsLink to GEO
11.499.3GSM176880AWP_Control_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
11.499.3GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
11.399.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.199.2ArrayExpressE-NASC-76-raw-cel-1359879262---
11.099.2GSM133712Villadsen_A-2-villa-wat_SLDGSE5723IdentificationOf genes responsive to non-metabolised glucose analogs: approach to hexokinase-independent glucose sensingLink to GEO
10.799.2GSM142689MH001_ATH1_A3-grevi-CC3GSE6158Investigating the links between organic acid and carbohydrate regulation of gene expression.Link to GEO
10.799.2GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.699.2GSM133716Villadsen_A-6-villa-man_SLDGSE5723IdentificationOf genes responsive to non-metabolised glucose analogs: approach to hexokinase-independent glucose sensingLink to GEO
10.699.2GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.599.2GSM133714Villadsen_A-4-villa-OMG_SLDGSE5723IdentificationOf genes responsive to non-metabolised glucose analogs: approach to hexokinase-independent glucose sensingLink to GEO
10.399.2GSM131451AtGen_6-9311_Heatstress-Shoots-3.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
10.399.2ArrayExpressE-MEXP-513-raw-cel-829814446---
10.299.2ArrayExpressE-MEXP-715-raw-cel-1121836030---
10.299.2ArrayExpressE-MEXP-715-raw-cel-1121836196---
10.299.2GSM131220Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1GSE5618Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTALink to GEO
10.299.2ArrayExpressCornah_1-17_wtc_Rep2_ATH1---
10.299.2ArrayExpressE-TABM-63-raw-cel-681137015---
9.999.1GSM131452AtGen_6-9312_Heatstress-Shoots-3.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.899.1GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.899.1ArrayExpressE-ATMX-28-raw-cel-1441104844---
9.899.1GSM311267Ws seedlings, biological rep2GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
9.799.1GSM133254RIKEN-GODA11B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.599.1GSM131176AtGen_D-8_1-WL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
9.399.1ArrayExpressE-ATMX-33-raw-cel-1562596310---
9.399.1GSM311266Ws seedlings, biological rep1GSE12401Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutantLink to GEO
9.299.1GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
9.299.1GSM133274RIKEN-GODA8B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlingsLink to GEO
9.299.1ArrayExpressE-TABM-63-raw-cel-681137052---
9.199.1GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
9.199.1ArrayExpressE-ATMX-33-raw-cel-1562596288---
9.199.1GSM318618Apex_Col_14DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
9.099.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.099.1ArrayExpressE-NASC-76-raw-cel-1359878875---
8.999.0ArrayExpressE-MEXP-1299-raw-cel-1519902087---
8.799.0ArrayExpressE-TABM-126-raw-cel-1242543753---
8.699.0GSM131224AtGen_6-0012_Control-Shoots-0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO



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