Specifically-expressed experiments

Gene ID	At3g49670
Gene name	BAM2 (BARELY ANY MERISTEM 2)
Functional description	Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
455.6	100.0	GSM133761	Lindsey_1-13_torpedo-cotyledon_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
12.3	99.3	GSM133759	Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.2	99.2	GSM131771	Quick_A96_1-48hr_Rep4_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
9.6	99.1	GSM131766	Quick_A74_1-96hr_Rep3_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
9.5	99.1	GSM133253	RIKEN-GODA11A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
9.3	99.1	GSM133263	RIKEN-GODA3A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
9.3	99.1	GSM131784	Quick_A41_2-24hr_Rep2_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
9.0	99.1	GSM131791	Quick_A71_2-48hr_Rep3_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
8.9	99.0	GSM133273	RIKEN-GODA8A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
8.5	99.0	GSM131758	Quick_A40_1-24hr_Rep2_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
8.5	99.0	GSM133257	RIKEN-GODA13A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
8.3	99.0	GSM133778	Lindsey_1-2_globular-apical_Rep2_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.2	99.0	ArrayExpress	E-MEXP-1304-raw-cel-1530618685	-	-	-
8.2	99.0	GSM131812	Quick_A42_3-24hr_Rep2_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)
8.2	99.0	GSM131795	Quick_A89_2-12hr_Rep4_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
8.1	98.9	GSM131765	Quick_A70_1-48hr_Rep3_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
8.1	98.9	GSM133269	RIKEN-GODA6A-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
8.0	98.9	GSM131835	Quick_A79_0-0hr_Rep4_ATH1	GSE5639	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Controls)
8.0	98.9	GSM133276	RIKEN-GODA9B-6	GSE5696	AtGenExpress: Effect of brassinosteroids in seedlings
7.9	98.9	GSM131825	Quick_A98_3-48hr_Rep4_ATH1	GSE5638	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 3: Ambient CO2 and Low Light)

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