Specifically-expressed experiments

Gene ID At3g49620
Gene name DIN11 (DARK INDUCIBLE 11)
Functional description encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
239.0100.0GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
168.7100.0GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
149.799.9GSM131162AtGen_C-12_3-Pi-6_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
143.999.9GSM131161AtGen_C-11_2-Pi-6_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
140.099.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
126.999.9ArrayExpressE-MEXP-711-raw-cel-1563002839---
117.699.9GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
110.899.9GSM133705Short_1-1_ozone_Rep1_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
108.199.9GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
107.099.9ArrayExpressE-MEXP-711-raw-cel-1563002803---
104.199.9GSM133025BC181-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
103.699.9ArrayExpressE-MEXP-711-raw-cel-1563002768---
99.299.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
84.199.9GSM133296NO.33GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
83.199.9GSM133294NO.31GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
76.799.9GSM133295NO.32GSE5698AtGenExpress: Cytokinin treatment of seedlingsLink to GEO
76.599.9GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
70.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
70.299.9GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
66.399.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
64.299.8GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
62.699.8ArrayExpressE-MEXP-711-raw-cel-1563002902---
62.099.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
61.699.8GSM133806Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
60.299.8GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
59.999.8ArrayExpressE-MEXP-711-raw-cel-1563002733---
57.599.8GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
56.799.8GSM133803Werner_1-4_mutant-24hr-control(j4s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
55.599.8ArrayExpressE-MEXP-546-raw-cel-863289532---
51.499.8GSM133028BC481-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
50.399.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
47.999.8GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
47.799.8ArrayExpressE-NASC-76-raw-cel-1359879056---
47.599.8ArrayExpressE-NASC-76-raw-cel-1359878976---
43.899.8GSM133802Werner_1-3_mutant-2hr-control(j2s)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
42.999.8GSM133807Werner_1-8_mutant-24hr-zearalenone(j4t)_Rep1_ATH1GSE5734Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutantLink to GEO
42.499.8GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
40.499.8GSM157362Ulker_2-5_WRKY-KO-40-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
39.299.8GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
35.199.7ArrayExpressE-NASC-76-raw-cel-1359879158---
35.199.7ArrayExpressE-MEXP-711-raw-cel-1563002698---
35.099.7GSM189173HSP90_Reduced_Salk_hsp90.2_Biological_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
34.299.7GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
33.299.7GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
30.899.7GSM131164AtGen_C-14_2-Pi-12_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
28.099.7GSM271079Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
26.299.7GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.799.7GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
24.499.6GSM271060Arabidopsis plant (Col-0), 4h_response to OPDA_rep3GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
23.899.6GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
23.899.6ArrayExpressE-MEXP-475-raw-cel-680982512---
23.799.6GSM131399AtGen_6-7411_UV-Bstress-Shoots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
23.699.6GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.799.6GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.599.6GSM131400AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
22.499.6GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
21.999.6GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
21.899.6GSM189165HSP90_Reduced_hsp90.2-3_Biological_Replicate_3GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
20.999.6ArrayExpressE-MEXP-1443-raw-cel-1581869632---
20.799.6GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
19.799.6ArrayExpressE-MEXP-475-raw-cel-680982521---
19.399.6GSM158703WT-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
19.399.6GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.999.5GSM25316648h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended nightLink to GEO
17.899.5GSM157359Ulker_2-2_WRKY-KO-02-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
16.699.5GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
16.499.5GSM131165AtGen_C-15_3-Pi-12_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
16.499.5ArrayExpressE-MEXP-475-raw-cel-680982467---
16.099.5GSM133716Villadsen_A-6-villa-man_SLDGSE5723IdentificationOf genes responsive to non-metabolised glucose analogs: approach to hexokinase-independent glucose sensingLink to GEO
14.899.4GSM271080Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO
14.799.4GSM131163AtGen_C-13_1-Pi-12_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
14.299.4ArrayExpressE-MEXP-546-raw-cel-863289476---
13.999.4GSM158702HY213-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible systemLink to GEO
13.799.4GSM272991flu over-tAPX 14-2, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
13.299.4GSM189163HSP90_Reduced_hsp90.2-3_Biological_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
13.199.4GSM131291AtGen_6-2311_Osmoticstress-Shoots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
12.899.3GSM74906ice1_6H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
12.699.3GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
12.699.3GSM157319Hammond_3-9_Caesium-treated-shoot_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
12.499.3GSM189171HSP90_Reduced_Salk_hsp90.3_Biological_Replicate_2GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
12.399.3GSM131292AtGen_6-2312_Osmoticstress-Shoots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
11.599.3GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.399.3GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
11.399.3GSM189105HSP90_Reduced_Control-2_Biological_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
10.899.2GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
10.899.2GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.499.2ArrayExpressE-NASC-76-raw-cel-1359878900---
10.099.2GSM189107HSP90_Reduced_Control-2_Biological_Replicate_2_Technical_Replicate_2GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
9.999.1GSM74902ice1_no treatment_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive TranscriptomeLink to GEO
9.599.1ArrayExpressE-NASC-76-raw-cel-1359878850---
9.199.1GSM272987flu, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
8.999.0GSM189106HSP90_Reduced_Control-2_Biological_Replicate_2_Technical_Replicate_1GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
8.899.0ArrayExpressE-TABM-61-raw-cel-683343528---
8.899.0GSM133026BC181-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
8.899.0ArrayExpressE-MEXP-475-raw-cel-680982458---
8.799.0GSM189118HSP90_Reduced_Col-0_CS60000_Biological_Replicate_3GSE7796Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 LevelsLink to GEO
8.799.0GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
8.699.0GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO



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