Specifically-expressed experiments

Gene ID At3g45620
Gene name transducin family protein / WD-40 repeat family protein
Functional description This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.299.8GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
50.199.8GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
21.499.6ArrayExpressE-MEXP-739-raw-cel-1099467303---
20.599.6GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
20.299.6GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
18.399.5ArrayExpressE-MEXP-739-raw-cel-1099467294---
17.899.5ArrayExpressE-ATMX-25-raw-cel-1441077500---
17.699.5GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.699.5ArrayExpressE-ATMX-25-raw-cel-1441077482---
16.099.5ArrayExpressE-MEXP-739-raw-cel-1099467321---
15.599.5GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.099.4GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
14.999.4GSM134441St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
14.899.4GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
14.299.4GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.899.4ArrayExpressE-MEXP-739-raw-cel-1099467330---
13.599.4ArrayExpressE-ATMX-25-raw-cel-1441077517---
13.399.4ArrayExpressE-MEXP-739-raw-cel-1099467267---
13.399.4ArrayExpressE-MEXP-739-raw-cel-1099467312---
12.799.3GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
12.499.3GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.499.3GSM134440St.Clair_1-65_322_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
12.399.3ArrayExpressE-MEXP-739-raw-cel-1099467339---
12.299.3GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
12.299.3GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.099.3ArrayExpressE-TABM-52-raw-cel-1583682926---
11.599.3GSM142596DB001_ATH1_A6-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
11.599.3GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
11.499.3GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.499.3GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.399.3ArrayExpressE-TABM-52-raw-cel-1583683598---
11.299.2GSM142594DB001_ATH1_A4-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
11.199.2GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
11.099.2GSM134439St.Clair_1-64_270b_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
11.099.2GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.099.2GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
10.999.2ArrayExpressE-TABM-52-raw-cel-1583683182---
10.799.2GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
10.799.2GSM269828WT leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
10.799.2ArrayExpressE-ATMX-27-raw-cel-1441080652---
10.699.2GSM269812WT leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
10.599.2GSM142592DB001_ATH1_A2-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
10.599.2GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.499.2GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
10.399.2ArrayExpressE-MEXP-739-raw-cel-1099467276---
10.399.2GSM142593DB001_ATH1_A3-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
10.299.2GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
10.299.2GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
10.099.2GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
10.099.2GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
9.999.1GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
9.899.1GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.299.1ArrayExpressE-ATMX-27-raw-cel-1441080540---
9.199.1ArrayExpressE-MEXP-739-raw-cel-1099467249---
9.199.1GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
9.099.1ArrayExpressE-TABM-52-raw-cel-1583683438---
9.099.1GSM134422St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
8.999.0GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.899.0ArrayExpressE-ATMX-27-raw-cel-1441080684---
8.899.0GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.799.0GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO



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