Specifically-expressed experiments

Gene ID At3g44720
Gene name ADT4 (arogenate dehydratase 4)
Functional description Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
64.099.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
59.899.8GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
58.399.8GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
57.999.8GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
57.599.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
55.699.8GSM270866Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1Link to GEO
55.099.8GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
54.799.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
50.899.8GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
48.199.8ArrayExpressE-MEXP-807-raw-cel-1173273252---
47.899.8GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
46.199.8GSM142593DB001_ATH1_A3-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
45.599.8GSM142591DB001_ATH1_A1-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
45.599.8GSM142594DB001_ATH1_A4-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
44.699.8GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
43.199.8GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
42.499.8GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
40.299.8GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
38.799.8ArrayExpressE-MEXP-711-raw-cel-1563002902---
37.599.7ArrayExpressE-MEXP-807-raw-cel-1173273144---
37.099.7GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.899.7GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
34.799.7GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
33.699.7GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
33.199.7GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
32.899.7GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
31.799.7GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
30.499.7GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
29.799.7GSM142596DB001_ATH1_A6-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
29.699.7GSM142592DB001_ATH1_A2-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cellsLink to GEO
27.999.7GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
27.499.7ArrayExpressE-MEXP-711-raw-cel-1563002803---
27.399.7GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
26.999.7GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
26.999.7GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
26.699.7GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
26.599.7GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.499.7ArrayExpressE-MEXP-711-raw-cel-1563002839---
22.799.6GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
22.599.6GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.399.6GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
21.899.6GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
21.399.6GSM142656MC002_ATH1_A12.1-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
21.299.6GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
21.199.6GSM142658MC002_ATH1_A12.3-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
21.199.6GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
20.299.6GSM131146AtGen_B-32_3-4-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.199.6GSM142630MC002_ATH1_A3.2-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
19.199.6ArrayExpressE-MEXP-711-raw-cel-1563002768---
18.799.5GSM131133AtGen_B-19_2-5-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
18.299.5GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.299.5GSM131119AtGen_B-5_1-5-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
18.199.5GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
18.099.5GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.099.5GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
17.899.5GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.799.5GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
17.699.5GSM142657MC002_ATH1_A12.2-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
16.899.5GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
16.699.5GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.299.5GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.199.5GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.099.5GSM131118AtGen_B-4_1-4-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.699.5GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown ArabidopsisLink to GEO
15.599.5GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.599.5GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.599.5GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.499.5GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.Link to GEO
15.399.4GSM142640MC002_ATH1_A6.3-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
15.299.4ArrayExpressE-MEXP-739-raw-cel-1099467339---
14.299.4GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
14.299.4GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
14.299.4GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
14.099.4GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.099.4GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.799.4ArrayExpressE-MEXP-739-raw-cel-1099467321---
13.799.4GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
13.799.4GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.599.4GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.499.4GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
13.399.4GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
13.099.4GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
13.099.4GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
12.799.3GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
12.699.3GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.699.3GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
12.499.3GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
12.399.3GSM1330372508GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
11.999.3GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
11.699.3GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.399.3GSM142652MC002_ATH1_A10.3-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.099.2GSM142650MC002_ATH1_A10.1-dubos-wthGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.999.2GSM39209RRE2_C3GSE2169rre1 and rre2 mutantsLink to GEO
10.999.2GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
10.899.2ArrayExpressE-MEXP-739-raw-cel-1099467240---
10.899.2ArrayExpressE-NASC-76-raw-cel-1359879132---
10.599.2GSM1330412525GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.499.2ArrayExpressE-MEXP-807-raw-cel-1173273116---
10.399.2ArrayExpressE-MEXP-449-raw-cel-676423253---
10.299.2ArrayExpressE-MEXP-739-raw-cel-1099467258---
9.999.1GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
9.899.1GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467285---
9.899.1GSM142661MB002_ATH1_A1-Eland-ch1GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown ArabidopsisLink to GEO
9.899.1GSM1330632526GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.699.1GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
9.699.1GSM142638MC002_ATH1_A6.1-dubos-5kc_repeatGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.399.1ArrayExpressE-MEXP-449-raw-cel-676423362---
9.399.1GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.299.1GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.Link to GEO
9.199.1GSM131342AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
9.199.1GSM131161AtGen_C-11_2-Pi-6_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
9.099.1ArrayExpressE-NASC-76-raw-cel-1359878976---
8.999.0ArrayExpressE-MEXP-711-raw-cel-1563002733---
8.999.0GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
8.699.0GSM226551Slice9JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage