Specifically-expressed experiments

Gene ID	At3g44320
Gene name	NIT3 (NITRILASE 3)
Functional description	This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
119.1	99.9	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
79.9	99.9	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
69.8	99.9	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
62.0	99.8	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
61.0	99.8	GSM266669	Arabidopsis, root cells, cortex, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
58.8	99.8	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
47.3	99.8	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
43.3	99.8	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
39.9	99.8	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
37.3	99.7	GSM237282	Root Selenate rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
36.3	99.7	GSM184913	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
35.5	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
35.3	99.7	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
32.8	99.7	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
31.3	99.7	GSM237283	Root Selenate rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
31.0	99.7	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
29.1	99.7	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
28.2	99.7	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
27.1	99.7	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
26.7	99.7	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
24.7	99.6	GSM133973	Birnbaum_1-3_src5-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
23.7	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
22.7	99.6	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
22.5	99.6	GSM271082	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
22.5	99.6	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
22.3	99.6	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
21.5	99.6	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
20.6	99.6	GSM271079	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
20.1	99.6	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
20.1	99.6	GSM271080	Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
19.8	99.6	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
19.8	99.6	GSM133812	Diamond_A-1-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
19.7	99.6	GSM133981	Birnbaum_1-11_StageII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
18.7	99.5	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
17.9	99.5	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.6	99.5	GSM265421	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
17.5	99.5	GSM133813	Diamond_A-2-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
17.4	99.5	ArrayExpress	E-MEXP-722-raw-cel-1062243516	-	-	-
17.4	99.5	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
16.9	99.5	GSM265468	Arabidopsis, whole roots, -Fe, 12 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
16.4	99.5	GSM271058	Arabidopsis plant (Col-0), 4h_response to OPDA_rep1	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
15.6	99.5	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
15.6	99.5	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
15.2	99.4	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
15.1	99.4	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
15.0	99.4	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
14.9	99.4	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
14.9	99.4	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
14.8	99.4	GSM131568	ATGE_95_B	GSE5631	AtGenExpress: Developmental series (roots)
14.7	99.4	GSM271060	Arabidopsis plant (Col-0), 4h_response to OPDA_rep3	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
14.3	99.4	ArrayExpress	E-MEXP-722-raw-cel-1062243470	-	-	-
14.3	99.4	GSM252691	Section of Root from 270 mm to 340 mm harvested immediately rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
14.2	99.4	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
14.0	99.4	GSM74902	ice1_no treatment_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
13.8	99.4	GSM265463	Arabidopsis, whole roots, -Fe, 3 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
13.6	99.4	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
13.6	99.4	GSM133121	S0_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
13.6	99.4	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
13.5	99.4	GSM184478	Lateral Root Cap root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.5	99.4	GSM252669	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
13.3	99.4	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
12.9	99.3	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.9	99.3	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.8	99.3	GSM142697	MH001_ATH1_A11-grevi-AT2	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
12.6	99.3	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
12.4	99.3	GSM184931	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
12.3	99.3	GSM265470	Arabidopsis, whole roots, -Fe, 24 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
12.3	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243559	-	-	-
12.3	99.3	ArrayExpress	E-MEXP-1112-raw-cel-1590666001	-	-	-
12.2	99.3	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.1	99.3	GSM131565	ATGE_94_B	GSE5631	AtGenExpress: Developmental series (roots)
12.1	99.3	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
12.0	99.3	GSM133814	Diamond_A-3-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.8	99.3	GSM133810	Diamond_A-3-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.8	99.3	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.8	99.3	GSM142696	MH001_ATH1_A10-grevi-AT1	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
11.7	99.3	GSM184898	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
11.6	99.3	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.5	99.3	GSM133123	S0_24H_A	GSE5688	AtGenExpress: Response to sulfate limitation
11.4	99.3	GSM133980	Birnbaum_1-10_StageII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.4	99.3	GSM133811	Diamond_A-4-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.2	99.2	GSM133809	Diamond_A-2-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
11.1	99.2	GSM265469	Arabidopsis, whole roots, -Fe, 24 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
11.0	99.2	GSM184915	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.9	99.2	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.9	99.2	GSM271059	Arabidopsis plant (Col-0), 4h_response to OPDA_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
10.8	99.2	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.8	99.2	ArrayExpress	E-MEXP-1112-raw-cel-1590666053	-	-	-
10.6	99.2	GSM252690	Section of Root from 270 mm to 340 mm harvested immediately rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
10.6	99.2	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.5	99.2	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
10.5	99.2	GSM142693	MH001_ATH1_A7-grevi-CT1	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
10.5	99.2	GSM133815	Diamond_A-4-Diamo-met_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
10.4	99.2	GSM74906	ice1_6H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
10.4	99.2	GSM142694	MH001_ATH1_A8-grevi-CT2	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
10.4	99.2	GSM131561	ATGE_93_A	GSE5631	AtGenExpress: Developmental series (roots)
10.1	99.2	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.1	99.2	GSM184899	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
10.0	99.2	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
10.0	99.2	GSM142698	MH001_ATH1_A12-grevi-AT3	GSE6158	Investigating the links between organic acid and carbohydrate regulation of gene expression.
10.0	99.2	GSM131566	ATGE_94_C	GSE5631	AtGenExpress: Developmental series (roots)
10.0	99.2	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
10.0	99.2	GSM184930	Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
10.0	99.2	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.0	99.2	GSM133133	S1500_12H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.8	99.1	GSM265465	Arabidopsis, whole roots, -Fe, 6 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.8	99.1	GSM131562	ATGE_93_B	GSE5631	AtGenExpress: Developmental series (roots)
9.8	99.1	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.7	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
9.6	99.1	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
9.6	99.1	GSM131557	ATGE_3_C	GSE5631	AtGenExpress: Developmental series (roots)
9.6	99.1	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
9.5	99.1	GSM252692	Section of Root from 270 mm to 340 mm harvested immediately rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
9.4	99.1	GSM133808	Diamond_A-1-Diamo-fum_SLD	GSE5735	Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)
9.3	99.1	GSM131555	ATGE_3_A	GSE5631	AtGenExpress: Developmental series (roots)
9.3	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
9.1	99.1	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.1	99.1	ArrayExpress	E-ATMX-5-raw-cel-1303134304	-	-	-
9.1	99.1	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
9.1	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
9.1	99.1	GSM131567	ATGE_95_A	GSE5631	AtGenExpress: Developmental series (roots)
9.0	99.1	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
8.9	99.0	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
8.9	99.0	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
8.9	99.0	GSM131569	ATGE_95_C	GSE5631	AtGenExpress: Developmental series (roots)
8.8	99.0	GSM184900	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
8.7	99.0	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
8.7	99.0	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-

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