Specifically-expressed experiments

Gene ID	At3g43960
Gene name	cysteine proteinase, putative
Functional description	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:anchored to membrane;MOPVBAF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
368.3	100.0	GSM226547	Slice5JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
292.6	100.0	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
271.0	100.0	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
211.8	100.0	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
185.6	100.0	GSM226537	L7SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
178.1	100.0	GSM226548	Slice6JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
152.7	99.9	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
150.4	99.9	GSM265423	Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
136.0	99.9	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
114.9	99.9	GSM106916	opr3_JA_22 hrs_Rep2	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
102.5	99.9	GSM106915	opr3_JA_22 hrs_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
85.6	99.9	GSM106917	opr3_JA_22 hrs_Rep3	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
81.3	99.9	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
64.5	99.8	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
59.7	99.8	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
58.1	99.8	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
48.5	99.8	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
46.8	99.8	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
43.6	99.8	GSM311283	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
42.4	99.8	GSM226549	Slice7JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
40.6	99.8	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
39.9	99.8	GSM147966	lec1-1 Globular Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
37.6	99.7	GSM226546	Slice4JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
36.7	99.7	GSM147963	WT Globular Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
36.7	99.7	GSM311284	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
36.6	99.7	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
35.2	99.7	GSM184895	Arabidopsis, root cells, cortex, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
33.8	99.7	GSM106973	ws_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
33.1	99.7	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
30.5	99.7	GSM147964	WT Globular Stage Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
27.6	99.7	GSM284398	Arabidopsis GGSc2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
25.4	99.6	GSM10445	WT 24-Hr Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
25.2	99.6	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
23.5	99.6	GSM184900	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
21.1	99.6	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
20.3	99.6	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.7	99.6	GSM10441	WT Ovule 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
19.4	99.6	GSM147965	lec1-1 Globular Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
19.1	99.6	GSM10446	WT 24-Hr Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
18.7	99.5	GSM142750	MJ001_ATH1_A1-jones-WT1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
18.4	99.5	GSM10442	WT Ovule 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
18.4	99.5	GSM133777	Lindsey_1-4_globular-basal_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
18.3	99.5	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.0	99.5	GSM311285	Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
17.8	99.5	GSM311295	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
17.1	99.5	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
17.1	99.5	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
17.1	99.5	GSM10478	lec1-1 24-Hr Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
16.8	99.5	GSM10480	lec1-1 Cotyledon Stage Seed 2	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
16.4	99.5	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
16.3	99.5	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
16.0	99.5	GSM10477	lec1-1 24-Hr Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
15.9	99.5	GSM184903	Arabidopsis, root cells, stele, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.6	99.5	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.4	99.5	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
15.3	99.4	GSM10479	lec1-1 Cotyledon Stage Seed 1	GSE1051	Seed development in LEAFY COTYLEDON1 mutants
15.1	99.4	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
15.0	99.4	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
14.6	99.4	GSM133980	Birnbaum_1-10_StageII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
14.5	99.4	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
13.0	99.4	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
12.6	99.3	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
12.2	99.3	GSM142751	MJ001_ATH1_A2-jones-WT2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
12.0	99.3	GSM311296	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
12.0	99.3	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.5	99.2	GSM62699	arf6/arf6 ARF8/arf8 flowers_stage 11-12	GSE2848	Auxin Response Factor mediated flower gene expression
10.4	99.2	GSM311286	Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
10.4	99.2	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.2	99.2	GSM131592	ATGE_36_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.5	99.1	GSM10448	WT Cotyledon Stage Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
9.4	99.1	GSM133981	Birnbaum_1-11_StageII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.1	99.1	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.1	99.1	GSM131591	ATGE_36_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.9	99.0	GSM265421	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
8.9	99.0	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
8.6	99.0	ArrayExpress	E-MEXP-285-raw-cel-440783335	-	-	-
8.6	99.0	ArrayExpress	E-MEXP-285-raw-cel-440783273	-	-	-

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