Specifically-expressed experiments

Gene ID At3g28540
Gene name AAA-type ATPase family protein
Functional description F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
246.5100.0GSM269812WT leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
134.299.9GSM269814T6 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
125.499.9GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
117.699.9GSM269828WT leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
79.499.9ArrayExpressE-MEXP-509-raw-cel-829148666---
63.099.8GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
56.599.8GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
53.599.8GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
50.199.8GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
49.999.8GSM269826C2 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
48.499.8GSM88050csn4-1_mutant replicate 2GSE3865CSN4-1 mutant analysisLink to GEO
44.899.8GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
43.799.8GSM269832T8 leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
43.599.8GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
40.899.8GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
39.399.8GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
38.399.8GSM142895MW001_ATH1_A3-Wheel-a14_repeatGSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
37.899.8GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
37.299.7GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
37.199.7GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
37.099.7GSM133107JD AT+EO TIME EXP3 EO INF 5DGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
36.899.7GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
36.299.7GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
35.699.7ArrayExpressE-MEXP-739-raw-cel-1099467303---
35.499.7ArrayExpressE-ATMX-32-raw-cel-1562974409---
35.199.7GSM128648Underwood_1-1_Cor-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
34.299.7GSM142843MG001_ATH1_A24-Torres-7N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.499.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
32.199.7GSM142841MG001_ATH1_A22-Torres-7N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.799.7GSM269830T6 leaf-well watered-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
30.399.7ArrayExpressE-MEXP-509-raw-cel-829148385---
30.399.7GSM269822T6 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
30.299.7GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
29.799.7GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
27.799.7ArrayExpressE-MEXP-509-raw-cel-829148090---
27.599.7GSM88049csn4-1_mutant replicate 1GSE3865CSN4-1 mutant analysisLink to GEO
27.299.7GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.699.7GSM269833T8 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
26.599.7GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.599.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.499.7ArrayExpressE-MEXP-739-raw-cel-1099467330---
26.399.7GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
26.399.7GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
26.099.7GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
25.899.7ArrayExpressE-MEXP-509-raw-cel-829148420---
25.699.7GSM128680Underwood_1-33_Mock-Inoculum-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
24.899.6GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
24.699.6GSM151703gh3.5-1D 48 hpi, biological replicate 1GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
24.599.6GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
23.899.6ArrayExpressE-MEXP-1454-raw-cel-1585858035---
23.699.6GSM128679Underwood_1-32_Mock-Inoculum-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
23.099.6GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
22.999.6ArrayExpressE-MEXP-1454-raw-cel-1585857925---
22.699.6GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.899.6GSM133106JD AT+EO TIME EXP3 EO INF 4DGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
21.699.6GSM245912csn3-1 mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
21.599.6ArrayExpressE-MEXP-739-raw-cel-1099467312---
21.499.6GSM133091JD AT+EO COL WT EXP2 05D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
20.999.6ArrayExpressE-MEXP-1454-raw-cel-1585857961---
20.899.6ArrayExpressE-MEXP-1454-raw-cel-1585857999---
20.399.6GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
20.399.6GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.199.6GSM197139S58-2_1 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
19.699.6GSM142842MG001_ATH1_A23-Torres-7N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.299.6ArrayExpressE-MEXP-739-raw-cel-1099467267---
18.799.5GSM133783Brueggemann_A-1-Brueg-uvb_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic StressLink to GEO
17.899.5GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.899.5GSM128664Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.599.5GSM149817SLWF infested arabidopsis rosette tissue, replicate 2GSE6516Silverleaf whitefly 2nd instar feeding on 7-week old Arabidopsis thaliana rosette leavesLink to GEO
17.499.5GSM142893MW001_ATH1_A2-Wheel-w14GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
17.499.5GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.199.5GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
17.099.5GSM131800Quick_A110_2-24hr_Rep2m_ATH1GSE5637Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)Link to GEO
16.999.5GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
16.699.5GSM269820WT leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
16.699.5GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysisLink to GEO
16.199.5GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
16.099.5GSM269816T8 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
15.199.4ArrayExpressE-ATMX-30-raw-cel-1513696778---
15.199.4GSM151704gh3.5-1D 48 hpi, biological replicate 2GSE6556Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)Link to GEO
15.099.4ArrayExpressE-MEXP-509-raw-cel-829148129---
15.099.4GSM1330512793GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
13.899.4GSM128670Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.799.4GSM1330482790GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
13.799.4GSM142880GW001_ATH1_A25-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
13.799.4GSM142817SS002_ATH1_A9-smith-16hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
13.499.4GSM269824T8 leaf-well watered-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
13.199.4GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
13.199.4GSM149816SLWF infested arabidopsis rosette tissue, replicate 1GSE6516Silverleaf whitefly 2nd instar feeding on 7-week old Arabidopsis thaliana rosette leavesLink to GEO
13.099.4GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
13.099.4GSM142891MW001_ATH1_A2-Wheel-a14_repeatGSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
13.099.4GSM197136aba3-1_1 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
12.899.3GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
12.899.3GSM128690Helenius_1-3_ERD15-oex-non-treated_Rep1_ATH1GSE5521Comparative ABA-treatment of Col-O vector control and transgenic plantsLink to GEO
12.699.3GSM131773Quick_A105_1-24hr_Rep1m_ATH1GSE5636Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)Link to GEO
12.499.3GSM268250dor-ck-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
12.299.3GSM142890MW001_ATH1_A2-Wheel-a05GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
12.099.3ArrayExpressE-ATMX-32-raw-cel-1562974681---
11.999.3ArrayExpressE-ATMX-32-raw-cel-1562974443---
11.799.3ArrayExpressE-MEXP-739-raw-cel-1099467249---
11.799.3GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
11.599.3GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
11.299.2GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
11.199.2ArrayExpressE-ATMX-30-raw-cel-1513696808---
11.099.2GSM197138S15-118_1 with array type ATH1 from AffymetrixGSE7961affy_aba_ath1-Characterization of aba3-1 suppressor mutantsLink to GEO
11.099.2GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
10.899.2ArrayExpressE-ATMX-6-raw-cel-1308219150---
10.799.2GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
10.699.2GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)Link to GEO
10.699.2GSM1330502791GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
10.699.2ArrayExpressE-ATMX-34-raw-cel-1563627275---
10.599.2ArrayExpressE-ATMX-32-raw-cel-1562974595---
10.499.2GSM131138AtGen_B-24_2-3-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.499.2GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
10.499.2GSM128681Underwood_1-34_Mock-Inoculum-7h_Rep4_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.299.2GSM142816SS002_ATH1_A8-smith-14hGSE6174Gene expression and carbohydrate metabolism through the diurnal cycleLink to GEO
10.099.2GSM131540ATGE_26_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467276---
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467321---
9.799.1GSM142894MW001_ATH1_A3-Wheel-a05GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
9.799.1ArrayExpressE-MEXP-739-raw-cel-1099467258---
9.799.1GSM131542ATGE_26_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
9.699.1GSM142886MW001_ATH1_A1-Wheel-a05GSE6179An investigation into transcriptional changes in developing Arabidopsis leaf caused by novel signalling protein, SPH1.Link to GEO
9.699.1GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.499.1GSM245910csn3-1 mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
9.399.1GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
9.399.1GSM142881GW001_ATH1_A26-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.399.1GSM128649Underwood_1-2_Cor-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.399.1GSM142877GW001_ATH1_A22-Warre-00fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.199.1GSM339547Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -9GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
9.199.1GSM131799Quick_A106_2-24hr_Rep1m_ATH1GSE5637Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)Link to GEO
9.199.1GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.099.1GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
9.099.1GSM133075JD AT+EO COL WT 05D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
9.099.1ArrayExpressE-MEXP-739-raw-cel-1099467240---
8.999.0GSM133114JD AT+EO TIME EXP3 UNINF 4DGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
8.999.0GSM133089JD AT+EO COL WT EXP2 04D INFECTEDGSE5686AtGenExpress: Pathogen Series: Response to Erysiphe orontii infectionLink to GEO
8.899.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
8.899.0GSM157368Ulker_1-4_WRKY-KO-54_Rep1_ATH1GSE6830Group II-A WRKY transcription factors and early leaf senescence (2)Link to GEO
8.699.0GSM339548Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -10GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO



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