Specifically-expressed experiments

Gene ID	At3g26830
Gene name	PAD3 (PHYTOALEXIN DEFICIENT 3)
Functional description	Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
110.5	99.9	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
110.4	99.9	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
97.4	99.9	GSM131160	AtGen_C-10_1-Pi-6_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
81.2	99.9	GSM131161	AtGen_C-11_2-Pi-6_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
79.7	99.9	GSM322548	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
77.1	99.9	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
77.0	99.9	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
71.2	99.9	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
70.7	99.9	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
68.3	99.9	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
65.6	99.8	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
65.4	99.8	GSM131162	AtGen_C-12_3-Pi-6_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
61.1	99.8	GSM133025	BC181-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
59.6	99.8	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
55.3	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
49.8	99.8	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
47.4	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
45.7	99.8	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
45.3	99.8	GSM131164	AtGen_C-14_2-Pi-12_REP2_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
44.8	99.8	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
42.8	99.8	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
42.2	99.8	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
42.2	99.8	GSM216981	Vector_shoots_4h_GA4+DEX_repl2	GSE8741	DELLA protein direct targets in Arabidopsis
42.0	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
41.3	99.8	GSM131400	AtGen_6-7412_UV-Bstress-Shoots-6.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
40.3	99.8	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
36.8	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
35.8	99.7	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
35.6	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
35.6	99.7	GSM134386	St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
35.2	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173272921	-	-	-
34.4	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
34.4	99.7	GSM133707	Short_1-3_ozone_Rep2_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
34.3	99.7	GSM134441	St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
33.4	99.7	GSM133705	Short_1-1_ozone_Rep1_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
32.4	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467330	-	-	-
32.1	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
31.2	99.7	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
30.4	99.7	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
29.9	99.7	GSM133708	Short_1-5_ozone_Rep3_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
29.1	99.7	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
29.1	99.7	GSM131399	AtGen_6-7411_UV-Bstress-Shoots-6.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
29.0	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
29.0	99.7	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
28.8	99.7	GSM134440	St.Clair_1-65_322_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
28.7	99.7	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
27.6	99.7	ArrayExpress	E-MEXP-711-raw-cel-1563002733	-	-	-
26.6	99.7	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
26.1	99.7	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
25.8	99.7	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
25.6	99.7	GSM216973	Vector_shoots_4h_GA4+DEX_repl1	GSE8741	DELLA protein direct targets in Arabidopsis
25.5	99.7	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
25.1	99.6	GSM131163	AtGen_C-13_1-Pi-12_REP1_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
25.0	99.6	ArrayExpress	E-MEXP-739-raw-cel-1099467339	-	-	-
24.5	99.6	GSM134423	St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
24.0	99.6	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
23.3	99.6	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
23.0	99.6	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
23.0	99.6	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
21.5	99.6	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
21.4	99.6	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
21.1	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273032	-	-	-
21.0	99.6	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
20.3	99.6	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
20.3	99.6	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
19.7	99.6	GSM134421	St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
19.7	99.6	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
19.6	99.6	GSM134405	St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
19.2	99.6	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
19.1	99.6	GSM152143	siz1-3 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
18.9	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467258	-	-	-
18.5	99.5	GSM134351	St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
17.9	99.5	GSM134422	St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
17.8	99.5	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.6	99.5	ArrayExpress	E-TABM-60-raw-cel-680980342	-	-	-
17.3	99.5	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
17.2	99.5	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
17.1	99.5	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
17.0	99.5	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
16.7	99.5	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.5	99.5	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
16.4	99.5	GSM131395	AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
16.2	99.5	GSM131165	AtGen_C-15_3-Pi-12_REP3_ATH1	GSE5616	AtGenExpress: Response to Phytophthora infestans
16.0	99.5	GSM134432	St.Clair_1-57_377_Kin-0_0.02%-silwet_Rep3_ATH1	GSE5757	Expression Level Polymorphism Project (ELP) - Kin-0
15.6	99.5	ArrayExpress	E-MEXP-546-raw-cel-863289693	-	-	-
15.6	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
15.5	99.5	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
15.2	99.4	GSM133028	BC481-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
15.2	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661573018	-	-	-
15.1	99.4	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
15.1	99.4	GSM131396	AtGen_6-7312_UV-Bstress-Shoots-3.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
15.1	99.4	ArrayExpress	E-TABM-60-raw-cel-680980278	-	-	-
14.7	99.4	GSM134349	St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
14.6	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
14.5	99.4	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
14.3	99.4	GSM128674	Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.3	99.4	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
14.2	99.4	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
13.9	99.4	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
13.8	99.4	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
13.8	99.4	GSM134378	St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
13.7	99.4	GSM204026	protoplast_control_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
13.5	99.4	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
13.1	99.4	ArrayExpress	E-ATMX-13-raw-cel-1556149759	-	-	-
13.1	99.4	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
13.1	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467285	-	-	-
13.0	99.4	ArrayExpress	E-MEXP-1784-raw-cel-1661573005	-	-	-
12.9	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467294	-	-	-
12.9	99.3	ArrayExpress	E-ATMX-31-raw-cel-1516947882	-	-	-
12.9	99.3	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
12.8	99.3	GSM134458	St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
12.8	99.3	GSM272988	flu, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
12.7	99.3	GSM131112	AtGen_B-40_3-5-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.6	99.3	GSM39206	Col_Chitin4	GSE2169	rre1 and rre2 mutants
12.6	99.3	ArrayExpress	E-TABM-61-raw-cel-683343528	-	-	-
12.5	99.3	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
12.4	99.3	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
12.4	99.3	GSM131140	AtGen_B-26_2-5-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.1	99.3	GSM134414	St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
12.1	99.3	ArrayExpress	E-MEXP-1784-raw-cel-1661572992	-	-	-
12.0	99.3	ArrayExpress	E-ATMX-31-raw-cel-1516947899	-	-	-
11.8	99.3	GSM205156	protoplast_controlDNA_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
11.6	99.3	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.5	99.3	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
11.4	99.3	GSM134450	St.Clair_1-75_376_Mt-0_0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
11.4	99.3	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
11.2	99.2	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
10.9	99.2	GSM134416	St.Clair_1-113_381_Van-0_0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
10.9	99.2	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.9	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173273005	-	-	-
10.8	99.2	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
10.6	99.2	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
10.4	99.2	GSM142902	WW001_ATH1_A1-WILLA-CON	GSE6181	Assembly of the cell wall pectic matrix.
10.2	99.2	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.0	99.2	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
10.0	99.2	GSM133783	Brueggemann_A-1-Brueg-uvb_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
9.6	99.1	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.6	99.1	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
9.5	99.1	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.2	99.1	ArrayExpress	E-TABM-61-raw-cel-683343624	-	-	-
9.2	99.1	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.2	99.1	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
9.1	99.1	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
9.0	99.1	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
9.0	99.1	GSM134340	St.Clair_1-1_289b_Col-0_0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
8.9	99.0	GSM133296	NO.33	GSE5698	AtGenExpress: Cytokinin treatment of seedlings
8.8	99.0	ArrayExpress	E-TABM-126-raw-cel-1242543881	-	-	-
8.6	99.0	GSM133053	2794	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

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