Specifically-expressed experiments

Gene ID At3g24495
Gene name MSH7 (MUTS HOMOLOG 7)
Functional description encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
50.999.8GSM133767Lindsey_1-19_torpedo-basal_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
45.399.8GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
45.299.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
39.699.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
37.599.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
36.199.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
33.599.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
33.099.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.799.7GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
32.399.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
32.299.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.299.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
30.199.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
29.899.7GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.999.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.599.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.399.7GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
27.799.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.099.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
25.799.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.299.6GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.199.6GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
17.899.5GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
15.999.5GSM128753De Veylder_1-5_E2Fa-Dpa_Rep1_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
15.699.5ArrayExpressE-MEXP-682-raw-cel-922397577---
15.199.4ArrayExpressE-MEXP-728-raw-cel-1062074684---
14.599.4ArrayExpressE-MEXP-728-raw-cel-1062074653---
14.099.4GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
13.699.4ArrayExpressE-MEXP-728-raw-cel-1062074758---
13.099.4GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
12.499.3GSM318624Apex_octa_18DAS_1GSE12691Knockdown and overexpression of CIN-TCP genesLink to GEO
12.299.3ArrayExpressE-MEXP-728-raw-cel-1062074718---
12.099.3GSM128756De Veylder_1-8_E2Fa-Dpa_Rep4_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
12.099.3ArrayExpressE-TABM-19-raw-cel-489757590---
12.099.3GSM133935Weigel_2-27_CHIP-211-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
11.999.3ArrayExpressE-MEXP-728-raw-cel-1062074264---
11.699.3GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
11.599.3GSM133923Weigel_2-15_CHIP-207-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
11.599.3ArrayExpressE-TABM-19-raw-cel-489757364---
11.599.3ArrayExpressE-MEXP-682-raw-cel-922397560---
11.499.3ArrayExpressE-MEXP-728-raw-cel-1062073253---
11.299.2ArrayExpressE-TABM-19-raw-cel-489757606---
11.299.2GSM133909Weigel_2-1_CHIP-203-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
10.999.2GSM131663ATGE_29_C2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.999.2GSM131675ATGE_49_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.899.2ArrayExpressE-MEXP-728-raw-cel-1062074089---
10.899.2GSM131661ATGE_29_A2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.699.2GSM128755De Veylder_1-7_E2Fa-Dpa_Rep3_ATH1GSE5529Arabidopsis E2F target genesLink to GEO
10.599.2GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.499.2GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.399.2GSM133769Lindsey_1-21_torpedo-basal_Rep6_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
10.399.2ArrayExpressE-MEXP-728-raw-cel-1062073338---
10.399.2GSM131672ATGE_48_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.299.2GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
10.099.2GSM131676ATGE_50_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.099.2ArrayExpressE-MEXP-728-raw-cel-1062074577---
9.999.1ArrayExpressE-MEXP-682-raw-cel-922397679---
9.899.1ArrayExpressE-TABM-19-raw-cel-489756915---
9.899.1GSM133910Weigel_2-2_CHIP-203-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
9.799.1GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.699.1GSM131653ATGE_8_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.599.1ArrayExpressE-MEXP-728-raw-cel-1062074226---
9.599.1GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.599.1GSM131665ATGE_46_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.399.1GSM131681ATGE_51_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.299.1GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
9.099.1GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.999.0GSM131667ATGE_47_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.999.0ArrayExpressE-MEXP-728-raw-cel-1062074608---
8.999.0GSM131652ATGE_8_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.999.0GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
8.999.0ArrayExpressE-TABM-19-raw-cel-489757545---
8.999.0GSM133933Weigel_2-25_CHIP-211-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
8.999.0GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
8.999.0GSM133943Weigel_2-35_CHIP-214-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
8.999.0ArrayExpressE-TABM-19-raw-cel-489757174---
8.899.0GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.899.0GSM131677ATGE_50_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.799.0ArrayExpressE-TABM-19-raw-cel-489757392---
8.799.0GSM133926Weigel_2-18_CHIP-208-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
8.799.0ArrayExpressE-MEXP-728-raw-cel-1062074005---



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