Specifically-expressed experiments

Gene ID At3g23050
Gene name IAA7 (INDOLE-3-ACETIC ACID 7)
Functional description Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.699.7GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
30.599.7GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
29.299.7GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
27.699.7GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
25.699.7GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
25.499.6GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
24.899.6ArrayExpressE-MEXP-715-raw-cel-1121835979---
23.999.6GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
23.799.6GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
22.999.6GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
22.999.6GSM131204AtGen_D-38_3-AL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
22.799.6GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
21.899.6ArrayExpressE-MEXP-715-raw-cel-1121836005---
21.799.6GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.499.6GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.099.6GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.399.6GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.199.6ArrayExpressE-MEXP-715-raw-cel-1121836247---
20.099.6GSM131213AtGen_D-47_3-US_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.099.6GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.499.6GSM131176AtGen_D-8_1-WL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.399.6GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.299.6GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.299.6GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.999.5GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
18.799.5GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.799.5GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.699.5GSM131183AtGen_D-15_1-US_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.299.5GSM131205AtGen_D-39_3-UL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.199.5GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.099.5GSM184892Arabidopsis, root cells, columella root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
17.999.5GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.999.5GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.899.5GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.799.5GSM131197AtGen_D-31_2-US_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.699.5GSM131172AtGen_D-4_1-RL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.699.5GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.699.5GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.599.5GSM131194AtGen_D-28_2-RS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.499.5GSM131181AtGen_D-13_1-BS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.399.5GSM266666Arabidopsis, root cells, columella root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
17.299.5GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.099.5GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.099.5GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.999.5GSM131195AtGen_D-29_2-BS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.999.5GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.799.5GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.299.5GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
16.299.5GSM131185AtGen_D-18_2-FL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.799.5GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.799.5GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.699.5GSM131198AtGen_D-32_2-WS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.599.5ArrayExpressE-MEXP-715-raw-cel-1121836087---
15.099.4GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.099.4GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.899.4ArrayExpressE-MEXP-715-raw-cel-1121836113---
14.899.4GSM131206AtGen_D-40_3-WL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.799.4GSM131189AtGen_D-22_2-AL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.699.4GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.999.4GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.899.4GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.799.4GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.699.4GSM131188AtGen_D-21_2-BL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.599.4GSM128785Somerville_1-8_stem-GC7_Rep1_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
13.499.4GSM131200AtGen_D-34_3-FL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.399.4GSM131173AtGen_D-5_1-BL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.399.4GSM128786Somerville_1-9_stem-GC8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
13.299.4GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.599.3ArrayExpressE-MEXP-715-raw-cel-1121836361---
12.399.3GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
11.999.3ArrayExpressE-MEXP-715-raw-cel-1121836334---
11.999.3ArrayExpressE-MEXP-715-raw-cel-1121835949---
11.799.3GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.499.3GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
11.499.3ArrayExpressE-MEXP-715-raw-cel-1121836221---
11.399.3GSM131657ATGE_27_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
11.399.3GSM128788Somerville_1-11_stem-GH8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0Link to GEO
10.999.2ArrayExpressE-MEXP-715-raw-cel-1121835915---
10.899.2GSM131655ATGE_27_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.299.2GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.899.1ArrayExpressE-MEXP-1094-raw-cel-1379507473---
9.699.1GSM2454922 hr Hypoxia Stress IP RNA Rep 3GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
9.699.1GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.599.1ArrayExpressE-MEXP-1299-raw-cel-1519902994---
9.399.1ArrayExpressE-MEXP-715-raw-cel-1121836153---
9.399.1GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
9.299.1ArrayExpressE-MEXP-1299-raw-cel-1519903848---
9.099.1GSM131656ATGE_27_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.799.0GSM2454749 hr Hypoxia Stress IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenationLink to GEO
8.799.0ArrayExpressE-MEXP-715-raw-cel-1121836196---
8.799.0ArrayExpressE-MEXP-1094-raw-cel-1379507433---



Back to the CoP portal site

Back to the KAGIANA project homepage