Specifically-expressed experiments

Gene ID	At3g23050
Gene name	IAA7 (INDOLE-3-ACETIC ACID 7)
Functional description	Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
34.6	99.7	GSM292081	pif1-2, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
30.5	99.7	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
29.2	99.7	GSM292080	pif1-2, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
27.6	99.7	GSM292077	Wt, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
25.6	99.7	GSM292079	pif1-2, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
25.4	99.6	GSM292078	Wt, dark sample, biological rep3	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
24.8	99.6	ArrayExpress	E-MEXP-715-raw-cel-1121835979	-	-	-
23.9	99.6	GSM131607	ATGE_42_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
23.7	99.6	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
22.9	99.6	GSM131606	ATGE_42_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
22.9	99.6	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
22.7	99.6	GSM292076	Wt, dark sample, biological rep1	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
21.8	99.6	ArrayExpress	E-MEXP-715-raw-cel-1121836005	-	-	-
21.7	99.6	GSM131608	ATGE_42_D	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
21.4	99.6	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
21.0	99.6	GSM131175	AtGen_D-7_1-UL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
20.3	99.6	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
20.1	99.6	ArrayExpress	E-MEXP-715-raw-cel-1121836247	-	-	-
20.0	99.6	GSM131213	AtGen_D-47_3-US_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
20.0	99.6	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
19.4	99.6	GSM131176	AtGen_D-8_1-WL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
19.3	99.6	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
19.2	99.6	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
19.2	99.6	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
18.9	99.5	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
18.7	99.5	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
18.7	99.5	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
18.6	99.5	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
18.2	99.5	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
18.1	99.5	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
18.0	99.5	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.9	99.5	GSM131215	AtGen_D-17_2-DL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.9	99.5	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.8	99.5	GSM131202	AtGen_D-36_3-RL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.7	99.5	GSM131197	AtGen_D-31_2-US_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.6	99.5	GSM131172	AtGen_D-4_1-RL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.6	99.5	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.6	99.5	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.5	99.5	GSM131194	AtGen_D-28_2-RS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
17.4	99.5	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
17.3	99.5	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
17.2	99.5	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.0	99.5	GSM131207	AtGen_D-41_3-DS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
17.0	99.5	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
16.9	99.5	GSM131195	AtGen_D-29_2-BS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
16.9	99.5	GSM131171	AtGen_D-3_1-PL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
16.7	99.5	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
16.2	99.5	GSM131199	AtGen_D-33_3-DL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
16.2	99.5	GSM131185	AtGen_D-18_2-FL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
15.7	99.5	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
15.7	99.5	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
15.6	99.5	GSM131198	AtGen_D-32_2-WS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
15.5	99.5	ArrayExpress	E-MEXP-715-raw-cel-1121836087	-	-	-
15.0	99.4	GSM131170	AtGen_D-2_1-FL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
15.0	99.4	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.8	99.4	ArrayExpress	E-MEXP-715-raw-cel-1121836113	-	-	-
14.8	99.4	GSM131206	AtGen_D-40_3-WL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
14.7	99.4	GSM131189	AtGen_D-22_2-AL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
14.6	99.4	GSM131193	AtGen_D-27_2-PS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.9	99.4	GSM131182	AtGen_D-14_1-AS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
13.8	99.4	GSM131216	AtGen_D-26_1-FS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.7	99.4	GSM131196	AtGen_D-30_2-AS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.6	99.4	GSM131188	AtGen_D-21_2-BL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.5	99.4	GSM128785	Somerville_1-8_stem-GC7_Rep1_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
13.4	99.4	GSM131200	AtGen_D-34_3-FL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.3	99.4	GSM131173	AtGen_D-5_1-BL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
13.3	99.4	GSM128786	Somerville_1-9_stem-GC8_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
13.2	99.4	GSM131203	AtGen_D-37_3-BL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.5	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121836361	-	-	-
12.3	99.3	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
11.9	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121836334	-	-	-
11.9	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121835949	-	-	-
11.7	99.3	GSM131187	AtGen_D-20_2-RL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.4	99.3	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
11.4	99.3	ArrayExpress	E-MEXP-715-raw-cel-1121836221	-	-	-
11.3	99.3	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
11.3	99.3	GSM128788	Somerville_1-11_stem-GH8_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
10.9	99.2	ArrayExpress	E-MEXP-715-raw-cel-1121835915	-	-	-
10.8	99.2	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.2	99.2	GSM282697	Col_BRZ_rep1	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
9.8	99.1	ArrayExpress	E-MEXP-1094-raw-cel-1379507473	-	-	-
9.6	99.1	GSM245492	2 hr Hypoxia Stress IP RNA Rep 3	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
9.6	99.1	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
9.5	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519902994	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-715-raw-cel-1121836153	-	-	-
9.3	99.1	GSM282699	Col_BRZ_rep3	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
9.2	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519903848	-	-	-
9.0	99.1	GSM131656	ATGE_27_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
8.7	99.0	GSM245474	9 hr Hypoxia Stress IP RNA Rep 1	GSE9719	Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
8.7	99.0	ArrayExpress	E-MEXP-715-raw-cel-1121836196	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-1094-raw-cel-1379507433	-	-	-

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