Specifically-expressed experiments

Gene ID At3g22840
Gene name ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)
Functional description Encodes an early light-inducible protein.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
66.999.8GSM339546Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -8GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
62.199.8GSM339545Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -7GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
59.499.8ArrayExpressE-TABM-52-raw-cel-1583683022---
55.899.8ArrayExpressE-TABM-52-raw-cel-1583682926---
46.099.8ArrayExpressE-TABM-52-raw-cel-1583683438---
43.799.8ArrayExpressE-MEXP-449-raw-cel-676423218---
39.799.8ArrayExpressE-TABM-52-raw-cel-1583683326---
38.899.8ArrayExpressE-MEXP-1112-raw-cel-1590665637---
38.599.8ArrayExpressE-TABM-52-raw-cel-1583683182---
38.199.8ArrayExpressE-MEXP-1112-raw-cel-1590665585---
36.099.7ArrayExpressE-TABM-52-raw-cel-1583683598---
34.699.7GSM133815Diamond_A-4-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
34.499.7ArrayExpressE-TABM-52-raw-cel-1583683662---
32.599.7ArrayExpressE-TABM-52-raw-cel-1583683246---
32.499.7ArrayExpressE-TABM-52-raw-cel-1583683214---
29.199.7ArrayExpressE-TABM-52-raw-cel-1583683582---
28.899.7ArrayExpressE-TABM-52-raw-cel-1583683294---
28.699.7ArrayExpressE-MEXP-449-raw-cel-676423253---
27.799.7GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
27.099.7GSM133814Diamond_A-3-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
26.999.7ArrayExpressE-MEXP-550-raw-cel-871342391---
26.999.7GSM47036hen1 26GSE2473Small RNA biogenesis mutantsLink to GEO
26.999.7ArrayExpressE-TABM-52-raw-cel-1583683118---
26.899.7GSM134309Penfield_1-11_embryo-control_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
26.899.7ArrayExpressE-TABM-52-raw-cel-1583683070---
26.299.7ArrayExpressE-MEXP-557-raw-cel-879731502---
25.499.6ArrayExpressE-MEXP-449-raw-cel-676422999---
25.399.6GSM187243Col_HL_BGSE7743Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High IrradianceLink to GEO
25.199.6ArrayExpressE-MEXP-557-raw-cel-879731574---
24.999.6GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
24.899.6GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
24.799.6ArrayExpressE-TABM-52-raw-cel-1583683422---
23.999.6ArrayExpressE-TABM-52-raw-cel-1583683454---
23.799.6ArrayExpressE-MEXP-557-raw-cel-879731583---
23.699.6GSM133813Diamond_A-2-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
23.399.6GSM109114vte2-1(Col-0) 1 day, biological rep2GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
23.299.6GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
23.099.6GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination StudyLink to GEO
22.099.6GSM109115vte2-1(Col-0) 1 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
22.099.6GSM131590ATGE_35_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.699.6GSM245926csn5 (csn5a-2 csn5b) mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
21.399.6ArrayExpressE-TABM-52-raw-cel-1583683038---
21.399.6GSM131185AtGen_D-18_2-FL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.299.6ArrayExpressE-MEXP-1112-raw-cel-1590666053---
21.299.6ArrayExpressE-TABM-52-raw-cel-1583683646---
20.999.6ArrayExpressE-MEXP-1112-raw-cel-1590666001---
20.599.6GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
20.299.6ArrayExpressE-TABM-52-raw-cel-1583683374---
20.099.6GSM131200AtGen_D-34_3-FL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.999.6ArrayExpressE-MEXP-449-raw-cel-676423133---
19.899.6GSM47046rdr2-1 36GSE2473Small RNA biogenesis mutantsLink to GEO
19.799.6GSM109108wild-type(Col-0) 1 day, biological rep2GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
19.599.6ArrayExpressE-MEXP-1344-raw-cel-1559561653---
19.499.6ArrayExpressE-ATMX-30-raw-cel-1513696731---
19.499.6GSM109113vte2-1(Col-0) 1 day, biological rep1GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
19.499.6ArrayExpressE-MEXP-449-raw-cel-676423362---
19.399.6GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
19.299.6ArrayExpressE-MEXP-449-raw-cel-676423036---
19.199.6GSM67084Arabidopsis_Stigma01GSE3056Arabidopsis Pollination StudyLink to GEO
19.099.5GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
19.099.5GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination StudyLink to GEO
18.799.5GSM133812Diamond_A-1-Diamo-met_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
18.799.5GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
18.699.5GSM187244Col-O_HL_CGSE7743Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High IrradianceLink to GEO
18.699.5ArrayExpressE-MEXP-449-raw-cel-676423095---
18.699.5ArrayExpressE-MEXP-739-raw-cel-1099467375---
18.399.5GSM142864GW001_ATH1_A9-Warre-WcaGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
18.299.5GSM47035hen1 25GSE2473Small RNA biogenesis mutantsLink to GEO
18.299.5ArrayExpressE-MEXP-1345-raw-cel-1559561259---
18.199.5GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
17.999.5GSM133811Diamond_A-4-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
17.999.5ArrayExpressE-MEXP-557-raw-cel-879731511---
17.999.5GSM47034hen1 24GSE2473Small RNA biogenesis mutantsLink to GEO
17.999.5GSM142865GW001_ATH1_A10-Warre-WcaGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
17.299.5GSM109109wild-type(Col-0) 1 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
17.299.5ArrayExpressCornah_1-15_msc_Rep3_ATH1---
17.199.5ArrayExpressE-TABM-52-raw-cel-1583683262---
17.099.5GSM142868GW001_ATH1_A13-Warre-3caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
17.099.5GSM133720Deeken_A-2-Deeke-Inf_SLD_REP1GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
16.999.5ArrayExpressE-MEXP-1344-raw-cel-1559561713---
16.999.5ArrayExpressE-MEXP-1784-raw-cel-1661572952---
16.699.5ArrayExpressCornah_1-14_msc_Rep2_ATH1---
16.699.5ArrayExpressE-TABM-52-raw-cel-1583682990---
16.699.5ArrayExpressE-TABM-52-raw-cel-1583683566---
16.599.5GSM142869GW001_ATH1_A14-Warre-3caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
16.599.5ArrayExpressE-MEXP-550-raw-cel-871342427---
16.599.5GSM47047rdr2-1 37GSE2473Small RNA biogenesis mutantsLink to GEO
16.499.5GSM133725McCormac_1-3_mutant-NFtreated_Rep1_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
16.499.5GSM133808Diamond_A-1-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
16.499.5GSM133809Diamond_A-2-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
16.499.5GSM245927csn5 (csn5a-2 csn5b) mutant dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
16.399.5ArrayExpressE-MEXP-739-raw-cel-1099467393---
16.299.5ArrayExpressE-MEXP-739-raw-cel-1099467384---
16.299.5GSM142866GW001_ATH1_A11-Warre-6caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
16.099.5GSM47044rdr1-1 34GSE2473Small RNA biogenesis mutantsLink to GEO
15.899.5GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
15.799.5ArrayExpressCornah_1-17_wtc_Rep2_ATH1---
15.799.5GSM131585ATGE_34_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
15.599.5GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.499.5ArrayExpressE-MEXP-1784-raw-cel-1661572978---
15.499.5GSM133783Brueggemann_A-1-Brueg-uvb_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic StressLink to GEO
15.399.4GSM47045rdr1-1 35GSE2473Small RNA biogenesis mutantsLink to GEO
15.399.4GSM133810Diamond_A-3-Diamo-fum_SLDGSE5735Identification of Core Genes Regulating Plant Programmed Cell Death (PCD)Link to GEO
15.399.4GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
15.199.4GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.999.4GSM47043rdr1-1 33GSE2473Small RNA biogenesis mutantsLink to GEO
14.999.4GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.899.4GSM128733Hennig_1-5_flowers-CK_021114_2_B_Rep2_ATH1GSE5526Transcriptional Programs of Early Reproductive Stages in ArabidopsisLink to GEO
14.699.4GSM131304AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
14.499.4ArrayExpressE-MEXP-1345-raw-cel-1559561289---
14.399.4GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
14.299.4GSM67079Arabidopsis_Ovary02GSE3056Arabidopsis Pollination StudyLink to GEO
14.199.4GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
14.199.4GSM47048rdr2-1 38GSE2473Small RNA biogenesis mutantsLink to GEO
14.199.4GSM131586ATGE_34_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.899.4GSM131587ATGE_34_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
13.799.4GSM88050csn4-1_mutant replicate 2GSE3865CSN4-1 mutant analysisLink to GEO
13.799.4GSM245920csn3-1 mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
13.699.4GSM187240Col-O_BL_BGSE7743Genome-wide gene expression analysis reveals a critical role for CRY1 in the Response of Arabidopsis to High IrradianceLink to GEO
13.699.4GSM47030dcl2-1 20GSE2473Small RNA biogenesis mutantsLink to GEO
13.299.4GSM109112vte1-1(Col-0) 1 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
13.199.4ArrayExpressE-MEXP-550-raw-cel-871342418---
13.099.4ArrayExpressE-MEXP-1344-raw-cel-1559561623---
12.999.3GSM47033dcl3-1 23GSE2473Small RNA biogenesis mutantsLink to GEO
12.999.3ArrayExpressE-ATMX-24-raw-cel-1441078254---
12.999.3GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
12.899.3GSM67080Arabidopsis_Ovary03GSE3056Arabidopsis Pollination StudyLink to GEO
12.699.3GSM245912csn3-1 mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
12.699.3GSM142870GW001_ATH1_A15-Warre-2caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
12.599.3ArrayExpressE-ATMX-32-raw-cel-1562974681---
12.599.3GSM109107wild-type(Col-0) 1 day, biological rep1GSE4847Expression data from tocopherol deficient seedlings of ArabidopsisLink to GEO
12.499.3GSM260955A2-LLOYD-PHO_REP2GSE10326Transcriptome analysis of pho3Link to GEO
12.399.3GSM105206sta1_no treatement_Rep2GSE4662STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress toleranceLink to GEO
12.299.3GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
12.099.3GSM317619Apex_14DAS_1GSE12676Arabidopsis thaliana Ler developmental seriesLink to GEO
12.099.3GSM142876GW001_ATH1_A21-Warre-00fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
12.099.3GSM142867GW001_ATH1_A12-Warre-6caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
11.999.3GSM133723McCormac_1-1_wildtype-NFtreated_Rep1_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO
11.999.3ArrayExpressE-MEXP-550-raw-cel-871342382---
11.899.3GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
11.899.3GSM128706Shirras_3-3_LabCalcicole-12.5mM-CaCl2_Rep1_ATH1GSE5523Environmental Genomics of Calcicole-calcifuge physiologyLink to GEO
11.699.3GSM128794Zarka_1-6_MT-WT24HB_Rep2_ATH1GSE5534Response to cold, plate grown plantsLink to GEO
11.599.3ArrayExpressE-MEXP-1784-raw-cel-1661572965---
11.499.3GSM131393AtGen_6-7221_UV-Bstress-Roots-1.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.299.2ArrayExpressE-MEXP-449-raw-cel-676423306---
11.199.2ArrayExpressE-MEXP-1112-raw-cel-1590665377---
11.099.2GSM245923csn4-1_mutant_dark replicate 2GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
11.099.2ArrayExpressE-MEXP-1443-raw-cel-1581869573---
11.099.2GSM131394AtGen_6-7222_UV-Bstress-Roots-1.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.999.2GSM67078Arabidopsis_Ovary01GSE3056Arabidopsis Pollination StudyLink to GEO
10.899.2GSM133816Yang_1-1_young-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thalianaLink to GEO
10.899.2ArrayExpressCornah_1-16_wtc_Rep1_ATH1---
10.799.2ArrayExpressE-TABM-52-raw-cel-1583683518---
10.799.2ArrayExpressE-ATMX-32-raw-cel-1562974621---
10.699.2GSM47031dcl3-121GSE2473Small RNA biogenesis mutantsLink to GEO
10.599.2GSM133403Bramke_A3-warre-S6CGSE5711Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.Link to GEO
10.499.2ArrayExpressE-MEXP-1112-raw-cel-1590665845---
10.399.2GSM245922csn4-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
10.399.2ArrayExpressE-MEXP-1112-raw-cel-1590665793---
10.199.2ArrayExpressE-MEXP-1784-raw-cel-1661573160---
10.199.2GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysisLink to GEO
10.199.2GSM268251WT-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.Link to GEO
10.199.2GSM47029dcl2-1 19GSE2473Small RNA biogenesis mutantsLink to GEO
10.099.2GSM260953A1-LLOYD-PHO_REP1GSE10326Transcriptome analysis of pho3Link to GEO
9.999.1ArrayExpressE-MEXP-185-raw-cel-358912110---
9.999.1GSM47024dcl1-7 14GSE2473Small RNA biogenesis mutantsLink to GEO
9.899.1GSM142871GW001_ATH1_A16-Warre-2caGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
9.899.1ArrayExpressE-MEXP-1592-raw-cel-1617527000---
9.799.1GSM134308Penfield_1-10_embryo-control_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
9.799.1ArrayExpressE-MEXP-1345-raw-cel-1559561229---
9.799.1GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
9.699.1GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.699.1ArrayExpressE-MEXP-1784-raw-cel-1661573173---
9.599.1ArrayExpressE-MEXP-1784-raw-cel-1661573186---
9.399.1GSM183514MYB29_OE_rep2GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
9.299.1GSM128793Zarka_1-5_MT-WT24HA_Rep1_ATH1GSE5534Response to cold, plate grown plantsLink to GEO
9.199.1ArrayExpressE-ATMX-24-raw-cel-1441078236---
9.099.1ArrayExpressE-MEXP-849-raw-cel-1181980894---
8.999.0GSM245921csn3-1_mutant_dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
8.799.0GSM183513MYB29_OE_rep1GSE7570ATR1_like_Clade_OE_and_miRLink to GEO
8.799.0GSM38671DSPSGSE2268Arabidopsis polysome microarrayLink to GEO
8.799.0ArrayExpressE-MEXP-550-raw-cel-871342409---



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