Specifically-expressed experiments

Gene ID At3g22160
Gene name VQ motif-containing protein
Functional description F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBV

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
88.499.9ArrayExpressE-MEXP-807-raw-cel-1173273170---
74.099.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
60.499.8ArrayExpressE-MEXP-807-raw-cel-1173273144---
53.399.8GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
51.099.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
49.899.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
47.899.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
46.099.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
42.499.8ArrayExpressE-MEXP-807-raw-cel-1173273116---
42.399.8ArrayExpressE-MEXP-807-raw-cel-1173273060---
41.899.8GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
41.699.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
39.199.8ArrayExpressE-MEXP-807-raw-cel-1173273252---
38.199.8ArrayExpressE-MEXP-807-raw-cel-1173272948---
35.699.7GSM269494mkk1/mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
34.499.7GSM269497mkk1/mkk2, 24h after BTH, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
33.899.7GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
33.799.7GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
33.299.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.699.7GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
30.499.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
29.899.7ArrayExpressE-MEXP-546-raw-cel-863289424---
29.799.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
29.199.7GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
28.199.7ArrayExpressE-MEXP-807-raw-cel-1173273196---
27.099.7GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.999.7GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.199.7ArrayExpressE-MEXP-546-raw-cel-863289586---
26.099.7ArrayExpressE-MEXP-449-raw-cel-676423362---
25.599.7ArrayExpressE-ATMX-25-raw-cel-1441077482---
24.599.6ArrayExpressE-MEXP-1443-raw-cel-1581869921---
23.999.6ArrayExpressE-MEXP-1474-raw-cel-1593932801---
23.599.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
23.299.6GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
22.199.6GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
21.899.6ArrayExpressE-MEXP-1474-raw-cel-1593932737---
21.899.6ArrayExpressE-MEXP-807-raw-cel-1173273223---
21.399.6GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
20.299.6GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
20.199.6ArrayExpressE-ATMX-25-raw-cel-1441077500---
20.099.6GSM269498mkk1/mkk2, 24h after BTH, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
19.799.6ArrayExpressE-ATMX-25-raw-cel-1441077517---
19.699.6GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
19.199.6GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
18.999.5GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
18.699.5GSM269496mkk1/mkk2, no-treatment, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
16.999.5GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
16.499.5GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
16.399.5GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
16.299.5ArrayExpressE-MEXP-807-raw-cel-1173273088---
16.299.5GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.099.5ArrayExpressE-MEXP-711-raw-cel-1563002902---
15.999.5GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
15.999.5GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
15.899.5GSM157318Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
15.799.5GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
15.799.5ArrayExpressE-MEXP-807-raw-cel-1173272921---
15.599.5GSM269495mkk1/mkk2, no-treatment, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
15.299.4GSM134422St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
15.299.4GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.299.4GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.699.4ArrayExpressE-MEXP-174-raw-cel-357966600---
14.299.4GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
13.899.4GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
13.899.4GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
13.899.4ArrayExpressE-MEXP-1474-raw-cel-1593932865---
13.499.4ArrayExpressE-MEXP-546-raw-cel-863289532---
13.399.4GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
12.999.3ArrayExpressE-MEXP-1474-raw-cel-1593932929---
12.999.3GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.699.3GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
12.499.3ArrayExpressE-MEXP-1474-raw-cel-1593932897---
12.499.3GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.299.3GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
12.299.3GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
12.099.3GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
11.999.3ArrayExpressE-MEXP-173-raw-cel-357965452---
11.999.3GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.799.3GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
11.699.3GSM269499mkk1/mkk2, 24h after BTH, rep-CGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutantLink to GEO
11.699.3GSM244448Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
11.699.3GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
11.599.3ArrayExpressE-MEXP-807-raw-cel-1173273032---
11.599.3GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
11.499.3GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.499.3GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
11.399.3ArrayExpressE-ATMX-27-raw-cel-1441080540---
10.999.2ArrayExpressE-MEXP-1474-raw-cel-1593932769---
10.399.2GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.399.2GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
10.099.2GSM134403St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
9.999.1GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
9.899.1GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
9.699.1GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
9.699.1GSM128655Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.699.1GSM1330412525GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injectionLink to GEO
9.599.1ArrayExpressE-MEXP-711-raw-cel-1563002733---
9.599.1ArrayExpressE-MEXP-1474-raw-cel-1593932641---
9.599.1ArrayExpressE-MEXP-711-raw-cel-1563002768---
9.499.1GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.399.1GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
9.399.1ArrayExpressE-ATMX-13-raw-cel-1556149743---
9.199.1GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
9.199.1GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
9.099.1GSM134404St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
8.999.0GSM157312Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plantsLink to GEO
8.899.0GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.799.0GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO



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