| Gene ID | At3g18524 |
| Gene name | MSH2 (MUTS HOMOLOG 2) |
| Functional description | Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 155.2 | 99.9 | GSM133762 | Lindsey_1-14_torpedo-root_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 111.9 | 99.9 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 38.5 | 99.8 | GSM205435 | Col_ leaf_ wildtype_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 29.5 | 99.7 | GSM143307 | Low_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 27.4 | 99.7 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 23.2 | 99.6 | GSM143308 | Tsu_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 22.8 | 99.6 | GSM184551 | Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 21.9 | 99.6 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 21.6 | 99.6 | GSM143309 | Tsu_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 20.0 | 99.6 | ArrayExpress | E-MEXP-682-raw-cel-922397577 | - | - | - |
| 19.5 | 99.6 | GSM253647 | Col-0 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 19.0 | 99.5 | GSM205426 | met1-3_leaf_second-selfed generation_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 19.0 | 99.5 | GSM143306 | High_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 17.9 | 99.5 | GSM143298 | Low_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 17.7 | 99.5 | ArrayExpress | E-MEXP-682-raw-cel-922397696 | - | - | - |
| 17.7 | 99.5 | GSM133773 | Lindsey_1-25_torpedo-meristem_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 17.5 | 99.5 | GSM253649 | Col-0-2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 16.4 | 99.5 | ArrayExpress | E-MEXP-682-raw-cel-922397594 | - | - | - |
| 16.3 | 99.5 | GSM143300 | Ts_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 16.2 | 99.5 | GSM143301 | Ts_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 16.1 | 99.5 | GSM253648 | Col-0-1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 15.8 | 99.5 | ArrayExpress | E-MEXP-728-raw-cel-1062073338 | - | - | - |
| 15.0 | 99.4 | GSM131664 | ATGE_46_A | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 14.8 | 99.4 | ArrayExpress | E-MEXP-682-raw-cel-922397611 | - | - | - |
| 14.7 | 99.4 | ArrayExpress | E-MEXP-682-raw-cel-922397662 | - | - | - |
| 14.6 | 99.4 | ArrayExpress | E-MEXP-728-raw-cel-1062074758 | - | - | - |
| 14.6 | 99.4 | ArrayExpress | E-MEXP-728-raw-cel-1062074684 | - | - | - |
| 14.5 | 99.4 | ArrayExpress | E-MEXP-728-raw-cel-1062074653 | - | - | - |
| 14.4 | 99.4 | ArrayExpress | E-MEXP-682-raw-cel-922397560 | - | - | - |
| 14.3 | 99.4 | ArrayExpress | E-MEXP-728-raw-cel-1062074155 | - | - | - |
| 14.1 | 99.4 | ArrayExpress | E-MEXP-682-raw-cel-922397713 | - | - | - |
| 14.0 | 99.4 | GSM143299 | High_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 13.7 | 99.4 | ArrayExpress | E-MEXP-728-raw-cel-1062074005 | - | - | - |
| 13.5 | 99.4 | GSM253651 | Ler 1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 13.3 | 99.4 | GSM143302 | Ts_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 13.2 | 99.4 | ArrayExpress | E-MEXP-682-raw-cel-922397679 | - | - | - |
| 13.0 | 99.4 | GSM131666 | ATGE_46_C | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 13.0 | 99.4 | GSM205364 | met1-3_leaf_second-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 12.8 | 99.3 | ArrayExpress | E-TABM-19-raw-cel-489757107 | - | - | - |
| 12.7 | 99.3 | ArrayExpress | E-MEXP-728-raw-cel-1062074089 | - | - | - |
| 12.6 | 99.3 | ArrayExpress | E-TABM-19-raw-cel-489756915 | - | - | - |
| 12.6 | 99.3 | GSM133910 | Weigel_2-2_CHIP-203-B_Rep2_ATH1 | GSE5746 | FRI FLC combos | |
| 12.6 | 99.3 | ArrayExpress | E-MEXP-728-raw-cel-1062074718 | - | - | - |
| 12.5 | 99.3 | GSM205428 | met1-3_leaf_fourth-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 12.4 | 99.3 | GSM131675 | ATGE_49_C | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 12.4 | 99.3 | ArrayExpress | E-MEXP-682-raw-cel-922397645 | - | - | - |
| 12.4 | 99.3 | GSM253650 | Ler 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 12.3 | 99.3 | GSM318624 | Apex_octa_18DAS_1 | GSE12691 | Knockdown and overexpression of CIN-TCP genes | |
| 12.1 | 99.3 | GSM253645 | High_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 12.1 | 99.3 | GSM253646 | Low_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 12.0 | 99.3 | GSM131105 | Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) | |
| 11.9 | 99.3 | GSM131106 | Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) | |
| 11.4 | 99.3 | GSM242955 | Steroid day 1 (day1D1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 11.3 | 99.3 | GSM133975 | Birnbaum_1-5_StageI-2_Rep2_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 11.2 | 99.2 | GSM253652 | Ler 2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 11.1 | 99.2 | GSM131671 | ATGE_48_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 10.8 | 99.2 | ArrayExpress | E-TABM-19-raw-cel-489757149 | - | - | - |
| 10.8 | 99.2 | GSM133942 | Weigel_2-34_CHIP-214-A_Rep1_ATH1 | GSE5746 | FRI FLC combos | |
| 10.7 | 99.2 | GSM131661 | ATGE_29_A2 | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 10.6 | 99.2 | GSM133909 | Weigel_2-1_CHIP-203-A_Rep1_ATH1 | GSE5746 | FRI FLC combos | |
| 10.6 | 99.2 | ArrayExpress | E-TABM-19-raw-cel-489757606 | - | - | - |
| 10.5 | 99.2 | ArrayExpress | E-MEXP-728-raw-cel-1062073902 | - | - | - |
| 10.4 | 99.2 | ArrayExpress | E-TABM-19-raw-cel-489757023 | - | - | - |
| 10.4 | 99.2 | GSM133939 | Weigel_2-31_CHIP-213-A_Rep1_ATH1 | GSE5746 | FRI FLC combos | |
| 10.3 | 99.2 | ArrayExpress | E-TABM-19-raw-cel-489757414 | - | - | - |
| 10.3 | 99.2 | GSM133927 | Weigel_2-19_CHIP-209-A_Rep1_ATH1 | GSE5746 | FRI FLC combos | |
| 10.0 | 99.2 | GSM131672 | ATGE_48_C | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.9 | 99.1 | GSM131107 | Broadley_1-5_A5-Bo+P2-nutrient-replete_Rep2_ATH1 | GSE5614 | Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study) | |
| 9.9 | 99.1 | ArrayExpress | E-TABM-19-raw-cel-489757174 | - | - | - |
| 9.9 | 99.1 | GSM133943 | Weigel_2-35_CHIP-214-B_Rep2_ATH1 | GSE5746 | FRI FLC combos | |
| 9.8 | 99.1 | GSM131663 | ATGE_29_C2 | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.8 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062074608 | - | - | - |
| 9.7 | 99.1 | GSM131653 | ATGE_8_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.7 | 99.1 | GSM134204 | Murray_3-2_D3-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 9.7 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062074577 | - | - | - |
| 9.6 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062074303 | - | - | - |
| 9.6 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062074264 | - | - | - |
| 9.5 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062073942 | - | - | - |
| 9.5 | 99.1 | GSM131665 | ATGE_46_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.5 | 99.1 | GSM131673 | ATGE_49_A | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.4 | 99.1 | GSM131677 | ATGE_50_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.1 | 99.1 | GSM142905 | WW002_ATH1_A1-willa-CON-REP3 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 9.1 | 99.1 | GSM131670 | ATGE_48_A | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.1 | 99.1 | ArrayExpress | E-TABM-19-raw-cel-489757545 | - | - | - |
| 9.1 | 99.1 | GSM133933 | Weigel_2-25_CHIP-211-A_Rep1_ATH1 | GSE5746 | FRI FLC combos | |
| 9.1 | 99.1 | GSM131676 | ATGE_50_A | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.0 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062073408 | - | - | - |
| 9.0 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062074226 | - | - | - |
| 9.0 | 99.1 | ArrayExpress | E-MEXP-728-raw-cel-1062073561 | - | - | - |
| 9.0 | 99.1 | GSM133929 | Weigel_2-21_CHIP-209-C_Rep3_ATH1 | GSE5746 | FRI FLC combos | |
| 9.0 | 99.1 | GSM131669 | ATGE_47_C | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 9.0 | 99.1 | ArrayExpress | E-TABM-19-raw-cel-489757463 | - | - | - |
| 8.9 | 99.0 | ArrayExpress | E-MEXP-728-raw-cel-1062074361 | - | - | - |
| 8.7 | 99.0 | ArrayExpress | E-MEXP-1246-raw-cel-1504120291 | - | - | - |
| 8.7 | 99.0 | ArrayExpress | E-MEXP-728-raw-cel-1062074409 | - | - | - |
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