| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 22.6 | 99.6 | GSM134314 | Penfield_1-16_embryo-PAC_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis |  |
| 21.9 | 99.6 | GSM252686 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 19.4 | 99.6 | GSM134315 | Penfield_1-17_embryo-PAC_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 19.1 | 99.6 | GSM133974 | Birnbaum_1-4_StageI-1_Rep1_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 18.8 | 99.5 | GSM134316 | Penfield_1-18_embryo-PAC_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 18.6 | 99.5 | GSM252688 | Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 17.8 | 99.5 | GSM133774 | Lindsey_1-26_torpedo-meristem_Rep2_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 17.4 | 99.5 | GSM134302 | Penfield_1-4_endosperm-ABA_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 17.1 | 99.5 | GSM134313 | Penfield_1-15_embryo-ABA_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 16.9 | 99.5 | GSM133975 | Birnbaum_1-5_StageI-2_Rep2_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 16.2 | 99.5 | GSM265418 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 16.1 | 99.5 | GSM134305 | Penfield_1-7_endosperm-PAC_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 15.4 | 99.5 | GSM252685 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 15.2 | 99.4 | GSM252689 | Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 15.2 | 99.4 | GSM134311 | Penfield_1-13_embryo-ABA_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 15.1 | 99.4 | GSM252684 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 15.0 | 99.4 | GSM134307 | Penfield_1-9_endosperm-PAC_Rep3_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 14.4 | 99.4 | GSM133755 | Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 14.0 | 99.4 | GSM265419 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 13.5 | 99.4 | GSM265427 | Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 13.2 | 99.4 | GSM252687 | Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 13.0 | 99.4 | GSM133319 | RIKEN-LI5A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 12.6 | 99.3 | GSM265426 | Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 12.4 | 99.3 | GSM232888 | Wt.4-3.240 | GSE9201 | Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5 | |
| 12.3 | 99.3 | GSM142596 | DB001_ATH1_A6-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 12.2 | 99.3 | GSM142594 | DB001_ATH1_A4-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 11.9 | 99.3 | ArrayExpress | E-MEXP-849-raw-cel-1181980982 | - | - | - |
| 11.8 | 99.3 | GSM134303 | Penfield_1-5_endosperm-ABA_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 11.6 | 99.3 | GSM232887 | Wt.3-1.240 | GSE9201 | Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5 | |
| 11.1 | 99.2 | GSM133304 | RIKEN-NAKABAYASHI1B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 10.9 | 99.2 | GSM184839 | Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 1 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 10.7 | 99.2 | GSM245919 | csn3-1 mutant dark replicate 1 | GSE9728 | COP9 signalosome (csn) mutant analysis | |
| 10.4 | 99.2 | ArrayExpress | E-MEXP-849-raw-cel-1181981030 | - | - | - |
| 10.4 | 99.2 | GSM142593 | DB001_ATH1_A3-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 10.3 | 99.2 | ArrayExpress | E-MEXP-849-raw-cel-1181980998 | - | - | - |
| 10.0 | 99.2 | GSM133313 | RIKEN-LI2A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 9.9 | 99.1 | GSM133770 | Lindsey_1-22_torpedo-apical_Rep4_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 9.7 | 99.1 | GSM133303 | RIKEN-NAKABAYASHI1A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 9.7 | 99.1 | GSM133311 | RIKEN-LI1A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 9.6 | 99.1 | GSM184831 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.6 | 99.1 | GSM184832 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.5 | 99.1 | GSM133977 | Birnbaum_1-7_StageI-4_Rep4_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 9.5 | 99.1 | GSM252666 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 9.5 | 99.1 | GSM142591 | DB001_ATH1_A1-Brown-cal | GSE6148 | The trans-differentiation of cultured Arabidopsis cells | |
| 9.4 | 99.1 | GSM133976 | Birnbaum_1-6_StageI-3_Rep3_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 9.4 | 99.1 | GSM184840 | Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.4 | 99.1 | GSM133117 | RIKEN-YAMAUCHI1A | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 9.1 | 99.1 | GSM134312 | Penfield_1-14_embryo-ABA_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 9.0 | 99.1 | GSM252664 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 8.9 | 99.0 | GSM134306 | Penfield_1-8_endosperm-PAC_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 8.9 | 99.0 | GSM133309 | RIKEN-NAKABAYASHI4B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 8.6 | 99.0 | GSM133308 | RIKEN-NAKABAYASHI4A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 8.6 | 99.0 | ArrayExpress | E-MEXP-849-raw-cel-1181981006 | - | - | - |
