Specifically-expressed experiments

Gene ID At3g15500
Gene name ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)
Functional description Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
138.199.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
136.599.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
114.899.9GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
98.899.9GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
95.299.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
92.599.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
88.799.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
73.499.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
69.399.9GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
68.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
63.499.8GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
58.799.8GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
57.199.8GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
48.099.8GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
47.999.8ArrayExpressE-MEXP-807-raw-cel-1173273116---
47.799.8ArrayExpressE-MEXP-807-raw-cel-1173272948---
39.099.8GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
36.899.7GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
36.699.7GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
34.499.7GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
34.299.7GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
32.799.7ArrayExpressE-MEXP-1443-raw-cel-1581869921---
31.999.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
31.099.7ArrayExpressE-MEXP-807-raw-cel-1173273060---
30.899.7GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
28.499.7GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
27.799.7GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
27.499.7ArrayExpressE-MEXP-1112-raw-cel-1590665325---
27.099.7ArrayExpressE-MEXP-807-raw-cel-1173273032---
25.899.7GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
25.399.6GSM131610ATGE_43_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
25.099.6ArrayExpressE-MEXP-807-raw-cel-1173273223---
25.099.6GSM131609ATGE_43_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
24.699.6ArrayExpressE-MEXP-807-raw-cel-1173273088---
24.699.6GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
24.399.6GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
24.099.6ArrayExpressE-TABM-63-raw-cel-681137195---
23.399.6GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
22.999.6GSM131611ATGE_43_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
22.499.6GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
22.499.6GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stressLink to GEO
22.299.6GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
21.899.6ArrayExpressE-TABM-126-raw-cel-1242543417---
21.699.6ArrayExpressE-TABM-63-raw-cel-681137124---
21.599.6GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
20.699.6GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
20.599.6GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
20.299.6GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
19.699.6ArrayExpressE-MEXP-807-raw-cel-1173273196---
19.599.6GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
19.599.6GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.099.5ArrayExpressE-TABM-62-raw-cel-720983372---
19.099.5GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.599.5GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
18.599.5GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
18.199.5ArrayExpressE-MEXP-807-raw-cel-1173273170---
18.099.5GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
17.899.5GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
17.799.5ArrayExpressE-MEXP-807-raw-cel-1173272921---
16.899.5GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
16.599.5GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
15.799.5GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
15.599.5GSM106911opr2_JA_2 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
14.899.4GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
14.799.4ArrayExpressE-MEXP-807-raw-cel-1173273005---
14.599.4GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
14.199.4GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
13.699.4GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
13.599.4ArrayExpressE-MEXP-546-raw-cel-863289532---
13.599.4ArrayExpressE-MEXP-1468-raw-cel-1591139018---
13.399.4GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.899.3GSM106910opr3_JA_2 hrs_rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
12.799.3ArrayExpressCapper_1-4_B8_water---
12.599.3ArrayExpressE-MEXP-1468-raw-cel-1591138952---
12.599.3GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.299.3ArrayExpressE-MEXP-1112-raw-cel-1590665273---
12.099.3GSM106914opr3_JA_8 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
11.999.3GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
11.999.3GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.699.3GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
11.699.3GSM39209RRE2_C3GSE2169rre1 and rre2 mutantsLink to GEO
11.599.3ArrayExpressE-MEXP-807-raw-cel-1173272894---
11.599.3GSM39208RRE2_C2GSE2169rre1 and rre2 mutantsLink to GEO
11.599.3ArrayExpressE-MEXP-1112-raw-cel-1590665741---
11.599.3GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
11.499.3GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.299.2GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
11.299.2GSM62704arf6 arf8 flowers_stage 13-14GSE2848Auxin Response Factor mediated flower gene expressionLink to GEO
11.199.2GSM133025BC181-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
11.199.2GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
11.099.2GSM184634Arabidopsis, root cells, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
10.999.2GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
10.899.2ArrayExpressE-MEXP-1112-raw-cel-1590665845---
10.899.2GSM184915Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.899.2ArrayExpressCapper_1-9_E6_estradiol---
10.399.2ArrayExpressE-MEXP-1468-raw-cel-1591138985---
10.399.2ArrayExpressE-TABM-62-raw-cel-720977593---
10.399.2ArrayExpressCapper_1-10_E6_water---
10.299.2GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
10.299.2ArrayExpressE-MEXP-1112-raw-cel-1590665793---
10.199.2GSM184920Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.199.2GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.199.2ArrayExpressE-MEXP-1112-raw-cel-1590665689---
10.099.2GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
10.099.2GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
9.899.1GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.899.1GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
9.799.1ArrayExpressE-ATMX-28-raw-cel-1441104835---
9.699.1GSM39201Col_C3GSE2169rre1 and rre2 mutantsLink to GEO
9.699.1GSM106909opr3-JA_2 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
9.699.1ArrayExpressE-TABM-62-raw-cel-720975362---
9.699.1GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.299.1ArrayExpressE-ATMX-28-raw-cel-1441104826---
9.199.1GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingLink to GEO
9.099.1GSM133731Buchanan-Wollaston_A-3-bwoll-C0S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescenceLink to GEO
9.099.1ArrayExpressCapper_1-7_D9_estradiol---
8.999.0ArrayExpressE-MEXP-1094-raw-cel-1379507513---
8.999.0ArrayExpressE-MEXP-711-raw-cel-1563002902---
8.899.0ArrayExpressE-ATMX-30-raw-cel-1513696906---
8.899.0ArrayExpressE-TABM-62-raw-cel-720981709---
8.899.0GSM184635Arabidopsis, root cells, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
8.699.0GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
8.699.0GSM152137Col-0 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO



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