Specifically-expressed experiments

Gene ID	At3g14940
Gene name	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)
Functional description	One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
269.8	100.0	GSM184511	Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
85.2	99.9	GSM184492	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
72.6	99.9	GSM184493	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
66.5	99.8	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
56.8	99.8	ArrayExpress	E-MEXP-635-raw-cel-912819824	-	-	-
55.0	99.8	GSM184491	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
50.0	99.8	ArrayExpress	E-MEXP-635-raw-cel-912819840	-	-	-
48.5	99.8	GSM184538	Whole roots 2hr KCl control treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
47.7	99.8	GSM184489	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
46.4	99.8	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
46.3	99.8	GSM184507	Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
45.5	99.8	GSM184539	Whole roots 2hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
42.9	99.8	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
41.1	99.8	GSM184490	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.9	99.8	GSM218591	Whole roots 3.5hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.8	99.8	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
40.5	99.8	GSM184488	Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.0	99.7	GSM184533	Protoplasted root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.0	99.7	GSM218594	Whole roots 3.5hr KNO3 treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
35.2	99.7	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
34.1	99.7	GSM218595	Whole roots 3.5hr KNO3 treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
33.2	99.7	GSM184560	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
31.5	99.7	GSM265432	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
30.4	99.7	GSM184934	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
29.7	99.7	GSM218596	Whole roots 3.5hr KNO3 treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.3	99.7	GSM184545	Whole roots 2hr KNO3 treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.1	99.7	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.1	99.7	GSM218592	Whole roots 3.5hr KCl control treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.1	99.7	GSM184936	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
28.2	99.7	GSM184543	Whole roots 2hr KNO3 treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
27.2	99.7	GSM184559	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
27.1	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
26.8	99.7	GSM184928	Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
26.5	99.7	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
25.7	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
25.6	99.7	GSM75514	Col-0 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
25.6	99.7	GSM184927	Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
25.4	99.6	GSM75510	Col-0 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
25.3	99.6	GSM184930	Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
24.4	99.6	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
23.1	99.6	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.0	99.6	GSM184485	Epidermis&Cortex root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
22.3	99.6	GSM184508	Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.9	99.6	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
21.9	99.6	GSM184504	Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.5	99.6	GSM184557	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.1	99.6	GSM218593	Whole roots 3.5hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.2	99.6	GSM260880	Yap_A1-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
19.6	99.6	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.6	99.6	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.5	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
19.0	99.5	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
18.9	99.5	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
18.9	99.5	GSM184935	Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
18.9	99.5	GSM184913	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
18.6	99.5	GSM184544	Whole roots 2hr KNO3 treated then frozen, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.0	99.5	GSM184929	Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
17.8	99.5	GSM184933	Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
17.1	99.5	GSM157329	Coates_1-1_Col-0_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
17.1	99.5	GSM184561	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.9	99.5	GSM265433	Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.7	99.5	GSM184926	Arabidopsis, whole roots, standard conditions, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
16.6	99.5	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.4	99.5	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
16.3	99.5	GSM184932	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
15.6	99.5	GSM184838	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8	GSE7639	Expression analysis of root developmental zones after treatment with salt
15.4	99.5	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.4	99.5	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.3	99.4	GSM265422	Arabidopsis, root, longitudinal zone 3, standard conditions, rep1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
15.3	99.4	GSM142753	MJ001_ATH1_A4-jones-rh2	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
15.0	99.4	GSM184503	Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.9	99.4	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
14.8	99.4	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
14.6	99.4	GSM265474	Arabidopsis, whole roots, -Fe, 72 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
14.3	99.4	GSM142755	MJ001_ATH1_A6-jones-RH-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
13.9	99.4	GSM142752	MJ001_ATH1_A3-jones-rh1	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
13.7	99.4	GSM75520	slr-1 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
13.5	99.4	ArrayExpress	E-MEXP-637-raw-cel-913038938	-	-	-
13.5	99.4	ArrayExpress	E-MEXP-637-raw-cel-913038965	-	-	-
13.5	99.4	GSM184509	Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.3	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937596	-	-	-
13.3	99.4	GSM237282	Root Selenate rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
13.2	99.4	GSM75519	slr-1 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
13.2	99.4	GSM184506	Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.0	99.4	ArrayExpress	E-MEXP-637-raw-cel-913039171	-	-	-
13.0	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937578	-	-	-
12.9	99.3	GSM226551	Slice9JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.9	99.3	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
12.8	99.3	GSM184837	Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7	GSE7639	Expression analysis of root developmental zones after treatment with salt
12.7	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
12.1	99.3	GSM75511	Col-0 6h MOCK replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
12.1	99.3	GSM157336	Coates_1-8_ara1/2mut_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
12.1	99.3	GSM75509	Col-0 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.9	99.3	GSM157337	Coates_1-9_Col-0_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
11.8	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243390	-	-	-
11.7	99.3	GSM142673	SF001_ATH1_A3-Fille-ANGR4-12	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
11.7	99.3	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.7	99.3	GSM142672	SF001_ATH1_A2-Fille-WT-+dex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
11.5	99.3	GSM184478	Lateral Root Cap root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.5	99.3	GSM237283	Root Selenate rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate
11.3	99.3	GSM184925	Arabidopsis, whole roots, standard conditions, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
11.3	99.3	GSM184481	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.1	99.2	GSM266670	Arabidopsis, root cells, cortex, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
10.8	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937515	-	-	-
10.6	99.2	GSM142754	MJ001_ATH1_A5-jones-WT-Rep3	GSE6165	The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
10.6	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937614	-	-	-
10.4	99.2	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
10.4	99.2	GSM265470	Arabidopsis, whole roots, -Fe, 24 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.3	99.2	GSM75517	slr-1 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.3	99.2	GSM265431	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.3	99.2	GSM184553	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	ArrayExpress	E-MEXP-722-raw-cel-1062242948	-	-	-
10.2	99.2	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.1	99.2	GSM184532	Protoplasted root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.1	99.2	GSM75516	slr-1 0h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.9	99.1	GSM184915	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
9.8	99.1	GSM265472	Arabidopsis, whole roots, -Fe, 48 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.8	99.1	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.8	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243183	-	-	-
9.8	99.1	GSM142671	SF001_ATH1_A1-Fille-WT-nodex	GSE6155	Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
9.5	99.1	GSM157340	Coates_1-12_ara1/2mut_Rep3_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.4	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
9.4	99.1	GSM157333	Coates_1-5_Col-0_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.4	99.1	GSM157334	Coates_1-6_ara1OX_Rep2_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
9.4	99.1	GSM265464	Arabidopsis, whole roots, -Fe, 3 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
9.3	99.1	GSM75515	Col-0 6h MOCK replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.2	99.1	GSM218590	Protoplasted root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
9.0	99.1	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.0	99.1	GSM237280	Root control rep 1	GSE9311	Gene expression in roots and shoots of plants grown on selenate
9.0	99.1	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
8.9	99.0	GSM270866	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
8.8	99.0	GSM184535	Protoplasted root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.8	99.0	GSM184843	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.7	99.0	GSM157330	Coates_1-2_ara1OX_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
8.6	99.0	GSM237281	Root control rep 2	GSE9311	Gene expression in roots and shoots of plants grown on selenate

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