Specifically-expressed experiments

Gene ID	At3g14530
Gene name	geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative
Functional description	F:farnesyltranstransferase activity;P:isoprenoid biosynthetic process;C:chloroplast;OBFPMAV

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
220.9	100.0	GSM184908	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
207.2	100.0	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
201.9	100.0	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
177.8	100.0	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
175.9	100.0	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
175.2	100.0	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
171.4	100.0	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
170.7	100.0	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
164.5	100.0	GSM184907	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
148.8	99.9	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
136.0	99.9	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
129.0	99.9	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
121.2	99.9	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
121.1	99.9	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
106.7	99.9	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.3	99.9	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.6	99.9	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
97.1	99.9	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
93.5	99.9	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
92.8	99.9	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
87.9	99.9	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
81.0	99.9	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
78.2	99.9	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
77.8	99.9	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
74.1	99.9	GSM133970	Birnbaum_1-21_LRC-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
68.8	99.9	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
65.0	99.8	GSM133975	Birnbaum_1-5_StageI-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
64.3	99.8	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
58.0	99.8	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
57.7	99.8	GSM184839	Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
56.8	99.8	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
46.9	99.8	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
46.2	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.2	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.1	99.8	GSM184831	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
42.2	99.8	GSM184840	Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
38.9	99.8	GSM133991	Birnbaum_1-24_gl2-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
35.7	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.3	99.7	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
33.2	99.7	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
31.0	99.7	GSM184832	Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
25.2	99.6	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
23.1	99.6	GSM133977	Birnbaum_1-7_StageI-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
21.5	99.6	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.5	99.6	GSM265419	Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.4	99.6	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
18.7	99.5	GSM133974	Birnbaum_1-4_StageI-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
18.1	99.5	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.6	99.5	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.1	99.5	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
16.9	99.5	GSM265415	Arabidopsis, root cells, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
15.3	99.4	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
14.7	99.4	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.2	99.4	GSM133969	Birnbaum_1-20_LRC-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
13.6	99.4	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.2	99.4	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.7	99.3	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.6	99.3	GSM184834	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4	GSE7639	Expression analysis of root developmental zones after treatment with salt
11.1	99.2	GSM184833	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3	GSE7639	Expression analysis of root developmental zones after treatment with salt
10.8	99.2	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
10.3	99.2	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.2	99.2	GSM133976	Birnbaum_1-6_StageI-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.2	99.2	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.0	99.2	GSM184842	Arabidopsis, root, longitudinal zone 2, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.3	99.1	GSM265427	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
9.3	99.1	GSM128731	Hennig_1-3_siliques-CK_021114_3_A_Rep1_ATH1	GSE5526	Transcriptional Programs of Early Reproductive Stages in Arabidopsis
8.6	99.0	GSM252666	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity

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