Specifically-expressed experiments

Gene ID At3g13960
Gene name AtGRF5 (GROWTH-REGULATING FACTOR 5)
Functional description Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
133.299.9GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
126.599.9GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
117.699.9ArrayExpressE-MEXP-849-raw-cel-1181981006---
85.799.9ArrayExpressE-MEXP-849-raw-cel-1181981030---
73.199.9ArrayExpressE-MEXP-849-raw-cel-1181981014---
58.099.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
57.999.8GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
51.199.8ArrayExpressE-MEXP-849-raw-cel-1181981046---
46.899.8ArrayExpressE-MEXP-849-raw-cel-1181981038---
46.299.8GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
43.199.8GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
38.499.8ArrayExpressE-MEXP-849-raw-cel-1181981022---
37.899.8GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
36.999.7GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
36.599.7GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
34.299.7GSM311287Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
33.799.7GSM133319RIKEN-LI5AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
33.299.7GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
32.499.7GSM131665ATGE_46_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
31.699.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.199.7GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
30.999.7ArrayExpressE-MEXP-682-raw-cel-922397560---
29.899.7GSM131678ATGE_50_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
29.299.7ArrayExpressE-MEXP-728-raw-cel-1062074264---
28.999.7GSM131676ATGE_50_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
28.899.7ArrayExpressE-MEXP-849-raw-cel-1181980998---
28.399.7ArrayExpressE-MEXP-728-raw-cel-1062074577---
28.199.7GSM131672ATGE_48_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.999.7GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.299.7GSM131653ATGE_8_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
27.199.7ArrayExpressE-MEXP-682-raw-cel-922397696---
26.999.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.999.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.899.7ArrayExpressE-MEXP-728-raw-cel-1062074538---
26.799.7GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
26.699.7GSM131677ATGE_50_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
26.499.7GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
26.399.7ArrayExpressE-MEXP-849-raw-cel-1181980990---
26.099.7ArrayExpressE-MEXP-682-raw-cel-922397577---
25.999.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.799.7ArrayExpressE-MEXP-728-raw-cel-1062074684---
25.699.7GSM131679ATGE_51_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
25.499.6ArrayExpressE-MEXP-849-raw-cel-1181980982---
25.099.6GSM131652ATGE_8_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.999.6GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.899.6GSM131663ATGE_29_C2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.599.6ArrayExpressE-MEXP-728-raw-cel-1062074361---
24.599.6GSM131661ATGE_29_A2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.499.6GSM131681ATGE_51_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.399.6ArrayExpressE-MEXP-728-raw-cel-1062074758---
24.299.6GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.299.6GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.199.6GSM131680ATGE_51_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
24.199.6ArrayExpressE-MEXP-728-raw-cel-1062074409---
23.899.6GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
23.799.6GSM133317RIKEN-LI4AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
23.799.6ArrayExpressE-MEXP-728-raw-cel-1062073338---
23.699.6GSM131671ATGE_48_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
23.599.6GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
23.399.6GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
23.399.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
23.199.6GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
23.099.6GSM311288Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
22.999.6GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
22.899.6ArrayExpressE-MEXP-682-raw-cel-922397713---
22.699.6ArrayExpressE-MEXP-728-raw-cel-1062074512---
22.699.6GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
22.699.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
22.499.6GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
22.399.6GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
22.399.6GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
22.399.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.199.6GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
21.799.6ArrayExpressE-TABM-19-raw-cel-489757149---
21.799.6GSM133942Weigel_2-34_CHIP-214-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
21.799.6GSM242960Steroid day 3 (day3D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
21.699.6GSM133322RIKEN-LI6BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
21.499.6GSM133321RIKEN-LI6AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
21.399.6GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
21.399.6GSM242954Mock day 1 (day1E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
21.199.6ArrayExpressE-MEXP-728-raw-cel-1062073253---
20.999.6ArrayExpressE-TABM-19-raw-cel-489757174---
20.999.6GSM133943Weigel_2-35_CHIP-214-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
20.999.6ArrayExpressE-MEXP-728-raw-cel-1062074226---
20.799.6GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
20.699.6GSM131675ATGE_49_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
20.399.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
20.299.6ArrayExpressE-MEXP-682-raw-cel-922397594---
20.199.6ArrayExpressE-MEXP-682-raw-cel-922397662---
19.999.6GSM131667ATGE_47_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
19.899.6GSM133930Weigel_2-22_CHIP-210-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
19.899.6ArrayExpressE-TABM-19-raw-cel-489757488---
19.599.6ArrayExpressE-MEXP-728-raw-cel-1062074608---
19.499.6ArrayExpressE-MEXP-728-raw-cel-1062074155---
18.799.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.799.5ArrayExpressE-MEXP-728-raw-cel-1062074089---
18.699.5GSM133320RIKEN-LI5BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
18.499.5ArrayExpressE-MEXP-728-raw-cel-1062074653---
18.299.5GSM242953Mock day 1 (day1E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
18.099.5ArrayExpressE-TABM-19-raw-cel-489757107---
17.999.5GSM131669ATGE_47_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
17.899.5GSM131674ATGE_49_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
17.299.5GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
16.999.5ArrayExpressE-TABM-19-raw-cel-489757236---
16.999.5GSM133944Weigel_2-36_CHIP-214_D_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
16.799.5GSM131668ATGE_47_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
16.699.5GSM133318RIKEN-LI4BGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
16.699.5GSM133313RIKEN-LI2AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
16.599.5ArrayExpressE-MEXP-728-raw-cel-1062073688---
16.299.5GSM133932Weigel_2-24_CHIP-210-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
16.299.5ArrayExpressE-TABM-19-raw-cel-489757526---
16.199.5ArrayExpressE-MEXP-682-raw-cel-922397611---
16.199.5ArrayExpressE-TABM-19-raw-cel-489757506---
16.199.5GSM133931Weigel_2-23_CHIP-210-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
15.899.5ArrayExpressE-MEXP-728-raw-cel-1062074303---
15.799.5ArrayExpressE-MEXP-682-raw-cel-922397645---
15.599.5ArrayExpressE-MEXP-728-raw-cel-1062073752---
15.599.5ArrayExpressE-MEXP-728-raw-cel-1062074718---
15.399.4GSM133927Weigel_2-19_CHIP-209-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
15.399.4ArrayExpressE-TABM-19-raw-cel-489757414---
15.199.4GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
15.199.4GSM133920Weigel_2-12_CHIP-206-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
15.199.4ArrayExpressE-TABM-19-raw-cel-489757278---
15.099.4ArrayExpressE-MEXP-728-raw-cel-1062074005---
14.999.4ArrayExpressE-TABM-19-raw-cel-489757066---
14.999.4GSM133940Weigel_2-32_CHIP-213-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
14.899.4ArrayExpressE-MEXP-682-raw-cel-922397679---
14.499.4GSM133939Weigel_2-31_CHIP-213-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
14.499.4ArrayExpressE-TABM-19-raw-cel-489757023---
14.299.4ArrayExpressE-MEXP-728-raw-cel-1062074471---
14.299.4ArrayExpressE-MEXP-728-raw-cel-1062073561---
13.799.4GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
13.799.4ArrayExpressE-MEXP-728-raw-cel-1062073942---
13.599.4ArrayExpressE-MEXP-728-raw-cel-1062073408---
13.499.4GSM134311Penfield_1-13_embryo-ABA_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in ArabidopsisLink to GEO
13.499.4ArrayExpressE-MEXP-728-raw-cel-1062073902---
13.099.4GSM131684ATGE_52_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
12.499.3ArrayExpressE-MEXP-728-raw-cel-1062073620---
12.399.3ArrayExpressE-TABM-19-raw-cel-489757436---
12.399.3GSM133928Weigel_2-20_CHIP-209-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
12.299.3GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
12.299.3GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.199.3GSM133929Weigel_2-21_CHIP-209-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
12.199.3ArrayExpressE-TABM-19-raw-cel-489757463---
12.099.3GSM133311RIKEN-LI1AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
11.999.3GSM133778Lindsey_1-2_globular-apical_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
11.999.3GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
11.899.3GSM131682ATGE_52_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
11.899.3GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
11.799.3ArrayExpressE-MEXP-728-raw-cel-1062073825---
11.799.3ArrayExpressE-MEXP-728-raw-cel-1062073467---
10.899.2GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
10.499.2ArrayExpressE-TABM-19-raw-cel-489757257---
10.499.2GSM133919Weigel_2-11_CHIP-206-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
10.199.2ArrayExpressE-TABM-19-raw-cel-489757157---
10.199.2GSM133916Weigel_2-8_CHIP-205-B_Rep2_ATH1GSE5746FRI FLC combosLink to GEO
10.099.2GSM242961Mock day 7 (day7E1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
9.599.1GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
9.499.1ArrayExpressE-TABM-19-raw-cel-489757392---
9.499.1GSM133926Weigel_2-18_CHIP-208-C_Rep3_ATH1GSE5746FRI FLC combosLink to GEO
9.299.1GSM133315RIKEN-LI3AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
9.199.1GSM131683ATGE_52_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.199.1ArrayExpressE-TABM-19-raw-cel-489757215---
9.199.1GSM133918Weigel_2-10_CHIP-206-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO
8.899.0ArrayExpressE-TABM-19-raw-cel-489757344---
8.899.0GSM133924Weigel_2-16_CHIP-208-A_Rep1_ATH1GSE5746FRI FLC combosLink to GEO



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