Specifically-expressed experiments

Gene ID	At3g12500
Gene name	ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)
Functional description	encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
128.6	99.9	GSM39208	RRE2_C2	GSE2169	rre1 and rre2 mutants
125.1	99.9	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
115.4	99.9	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
113.0	99.9	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
101.3	99.9	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
98.7	99.9	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
97.3	99.9	GSM39199	Col_C1	GSE2169	rre1 and rre2 mutants
94.5	99.9	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
90.2	99.9	GSM133721	Deeken_A-1-Deeke-Tum_SLD_REP2	GSE5725	Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
83.4	99.9	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
82.4	99.9	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
79.6	99.9	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
76.6	99.9	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
71.7	99.9	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
67.2	99.8	ArrayExpress	E-ATMX-31-raw-cel-1516947984	-	-	-
67.1	99.8	ArrayExpress	E-ATMX-31-raw-cel-1516948018	-	-	-
66.0	99.8	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
65.0	99.8	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
62.8	99.8	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
60.5	99.8	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
60.3	99.8	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
59.8	99.8	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
57.7	99.8	ArrayExpress	E-ATMX-31-raw-cel-1516948001	-	-	-
56.2	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937515	-	-	-
53.7	99.8	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
50.9	99.8	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
50.9	99.8	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
46.4	99.8	GSM39206	Col_Chitin4	GSE2169	rre1 and rre2 mutants
43.6	99.8	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
33.1	99.7	GSM131305	AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
33.1	99.7	GSM133719	Deeken_A-1-Deeke-Tum_SLD_REP1	GSE5725	Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
32.1	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
30.7	99.7	GSM131297	AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
30.0	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
26.2	99.7	GSM131306	AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
25.8	99.7	GSM131301	AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
23.7	99.6	GSM131302	AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
23.6	99.6	GSM131330	AtGen_6-3622_Saltstress-Roots-24.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
23.2	99.6	GSM290758	root - 01% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
22.8	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
22.6	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
22.2	99.6	ArrayExpress	E-MEXP-711-raw-cel-1563002839	-	-	-
21.6	99.6	GSM131329	AtGen_6-3621_Saltstress-Roots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
21.2	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937479	-	-	-
20.8	99.6	GSM131294	AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
20.8	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937497	-	-	-
20.2	99.6	GSM131326	AtGen_6-3522_Saltstress-Roots-12.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
19.9	99.6	GSM27361	WT Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
19.5	99.6	ArrayExpress	E-MEXP-1474-raw-cel-1593932929	-	-	-
18.8	99.5	GSM131298	AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
17.3	99.5	GSM291124	root - 21% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
17.2	99.5	GSM131381	AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
16.6	99.5	ArrayExpress	E-MEXP-1474-raw-cel-1593932865	-	-	-
16.2	99.5	GSM290759	root - 01% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
16.2	99.5	ArrayExpress	E-MEXP-1262-raw-cel-1502676096	-	-	-
15.9	99.5	GSM131293	AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
15.7	99.5	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
13.7	99.4	ArrayExpress	E-MEXP-1262-raw-cel-1502676015	-	-	-
13.5	99.4	ArrayExpress	E-MEXP-1474-raw-cel-1593932801	-	-	-
13.5	99.4	GSM142786	HO001_ATH1_A3-Okamo-WS-ABA	GSE6171	Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABA
13.3	99.4	GSM131350	AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
13.1	99.4	GSM131373	AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
13.1	99.4	GSM142784	HO001_ATH1_A1-Okamo-gpal-ABA	GSE6171	Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABA
12.7	99.3	ArrayExpress	E-MEXP-711-raw-cel-1563002803	-	-	-
12.6	99.3	GSM142884	CW001_ATH1_A1.3-WestC-kuu	GSE6178	Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
12.2	99.3	GSM131382	AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
12.0	99.3	GSM290755	root - 01% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.0	99.3	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
12.0	99.3	GSM131303	AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
11.9	99.3	GSM290828	root - 04% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.8	99.3	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.7	99.3	ArrayExpress	E-MEXP-711-raw-cel-1563002768	-	-	-
11.6	99.3	GSM133892	Schroeder_1-6_JS43-control-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
11.2	99.2	GSM226554	Slice12JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.2	99.2	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.1	99.2	GSM131374	AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
11.1	99.2	GSM128693	Heinekamp_1-2_control-root_Rep1_ATH1	GSE5522	Low chronic exposure of Arabidopsis thaliana to Caesium-137
11.1	99.2	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
11.1	99.2	GSM142639	MC002_ATH1_A6.2-dubos-5kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
11.0	99.2	GSM133029	BC482-1	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
10.9	99.2	GSM131241	AtGen_6-0321_Control-Roots-3.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.9	99.2	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.8	99.2	GSM131410	AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
10.7	99.2	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
10.4	99.2	GSM133722	Deeken_A-2-Deeke-Inf_SLD_REP2	GSE5725	Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
10.3	99.2	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
10.3	99.2	GSM131242	AtGen_6-0322_Control-Roots-3.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.1	99.2	GSM290825	root - 04% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.1	99.2	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
10.0	99.2	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.9	99.1	GSM290753	root - 01% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.8	99.1	GSM131563	ATGE_93_C	GSE5631	AtGenExpress: Developmental series (roots)
9.8	99.1	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.7	99.1	GSM131409	AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.6	99.1	GSM133894	Schroeder_1-12_JS44-starve-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
9.3	99.1	GSM27365	lec1-1 Root	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
9.3	99.1	ArrayExpress	E-MEXP-1262-raw-cel-1502676166	-	-	-
9.3	99.1	GSM131562	ATGE_93_B	GSE5631	AtGenExpress: Developmental series (roots)
9.1	99.1	GSM184561	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	ArrayExpress	E-MEXP-1474-raw-cel-1593932897	-	-	-
9.0	99.1	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.7	99.0	GSM271066	Arabidopsis plant (tga2-5-6), 4h_control_rep2	GSE10732	Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA

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