Specifically-expressed experiments

Gene ID At3g12500
Gene name ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)
Functional description encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
128.699.9GSM39208RRE2_C2GSE2169rre1 and rre2 mutantsLink to GEO
125.199.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
115.499.9GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
113.099.9GSM39200Col_C2GSE2169rre1 and rre2 mutantsLink to GEO
101.399.9GSM39201Col_C3GSE2169rre1 and rre2 mutantsLink to GEO
98.799.9GSM39192RRE1_C2GSE2169rre1 and rre2 mutantsLink to GEO
97.399.9GSM39199Col_C1GSE2169rre1 and rre2 mutantsLink to GEO
94.599.9GSM39209RRE2_C3GSE2169rre1 and rre2 mutantsLink to GEO
90.299.9GSM133721Deeken_A-1-Deeke-Tum_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
83.499.9GSM39193RRE1_C3GSE2169rre1 and rre2 mutantsLink to GEO
82.499.9GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
79.699.9GSM39210RRE2_C4GSE2169rre1 and rre2 mutantsLink to GEO
76.699.9GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
71.799.9GSM39191RRE1_C1GSE2169rre1 and rre2 mutantsLink to GEO
67.299.8ArrayExpressE-ATMX-31-raw-cel-1516947984---
67.199.8ArrayExpressE-ATMX-31-raw-cel-1516948018---
66.099.8GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
65.099.8GSM39202Col_C4GSE2169rre1 and rre2 mutantsLink to GEO
62.899.8GSM39194RRE1_C4GSE2169rre1 and rre2 mutantsLink to GEO
60.599.8GSM39207RRE2_C1GSE2169rre1 and rre2 mutantsLink to GEO
60.399.8GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
59.899.8GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
57.799.8ArrayExpressE-ATMX-31-raw-cel-1516948001---
56.299.8ArrayExpressE-MEXP-791-raw-cel-1122937515---
53.799.8GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
50.999.8GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
50.999.8GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
46.499.8GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
43.699.8GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
33.199.7GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
33.199.7GSM133719Deeken_A-1-Deeke-Tum_SLD_REP1GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
32.199.7ArrayExpressE-MEXP-791-raw-cel-1122937605---
30.799.7GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
30.099.7ArrayExpressE-MEXP-791-raw-cel-1122937623---
26.299.7GSM131306AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
25.899.7GSM131301AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
23.799.6GSM131302AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
23.699.6GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
23.299.6GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
22.899.6ArrayExpressE-MEXP-791-raw-cel-1122937587---
22.699.6ArrayExpressE-MEXP-711-raw-cel-1563002902---
22.299.6ArrayExpressE-MEXP-711-raw-cel-1563002839---
21.699.6GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
21.299.6ArrayExpressE-MEXP-791-raw-cel-1122937479---
20.899.6GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
20.899.6ArrayExpressE-MEXP-791-raw-cel-1122937497---
20.299.6GSM131326AtGen_6-3522_Saltstress-Roots-12.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
19.999.6GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
19.599.6ArrayExpressE-MEXP-1474-raw-cel-1593932929---
18.899.5GSM131298AtGen_6-2422_Osmoticstress-Roots-6.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
17.399.5GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
17.299.5GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.699.5ArrayExpressE-MEXP-1474-raw-cel-1593932865---
16.299.5GSM290759root - 01% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
16.299.5ArrayExpressE-MEXP-1262-raw-cel-1502676096---
15.999.5GSM131293AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
15.799.5GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
13.799.4ArrayExpressE-MEXP-1262-raw-cel-1502676015---
13.599.4ArrayExpressE-MEXP-1474-raw-cel-1593932801---
13.599.4GSM142786HO001_ATH1_A3-Okamo-WS-ABAGSE6171Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABALink to GEO
13.399.4GSM131350AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
13.199.4GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
13.199.4GSM142784HO001_ATH1_A1-Okamo-gpal-ABAGSE6171Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABALink to GEO
12.799.3ArrayExpressE-MEXP-711-raw-cel-1563002803---
12.699.3GSM142884CW001_ATH1_A1.3-WestC-kuuGSE6178Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutantsLink to GEO
12.299.3GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
12.099.3GSM290755root - 01% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.099.3GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
12.099.3GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
11.999.3GSM290828root - 04% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.899.3GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.799.3ArrayExpressE-MEXP-711-raw-cel-1563002768---
11.699.3GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
11.299.2GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
11.299.2GSM291113root - 21% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
11.199.2GSM131374AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
11.199.2GSM128693Heinekamp_1-2_control-root_Rep1_ATH1GSE5522Low chronic exposure of Arabidopsis thaliana to Caesium-137Link to GEO
11.199.2GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.199.2GSM142639MC002_ATH1_A6.2-dubos-5kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.099.2GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
10.999.2GSM131241AtGen_6-0321_Control-Roots-3.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.999.2GSM179963Arabidopsis aux1 mutant roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.899.2GSM131410AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.799.2GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.499.2GSM133722Deeken_A-2-Deeke-Inf_SLD_REP2GSE5725Agrobacterium tumefaciens-induced tumour development of Arabidopsis thalianaLink to GEO
10.399.2GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
10.399.2GSM131242AtGen_6-0322_Control-Roots-3.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.199.2GSM290825root - 04% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.199.2GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.099.2GSM290761root - 04% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.999.1GSM290753root - 01% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.899.1GSM131563ATGE_93_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.899.1GSM291020root - 08% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.799.1GSM131409AtGen_6-7621_UV-Bstress-Roots-24.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.699.1GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in rootsLink to GEO
9.399.1GSM27365lec1-1 RootGSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
9.399.1ArrayExpressE-MEXP-1262-raw-cel-1502676166---
9.399.1GSM131562ATGE_93_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
9.199.1GSM184561Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.199.1ArrayExpressE-MEXP-1474-raw-cel-1593932897---
9.099.1GSM291108root - 21% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
8.799.0GSM271066Arabidopsis plant (tga2-5-6), 4h_control_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDALink to GEO



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