Specifically-expressed experiments

Gene ID At3g12220
Gene name scpl16 (serine carboxypeptidase-like 16)
Functional description F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
180.1100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
158.499.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
154.299.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
150.399.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
144.199.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
140.999.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
128.699.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
123.799.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
120.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
101.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
97.999.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
92.899.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
91.399.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
87.399.9GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
83.699.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
77.599.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
69.099.9GSM218588Protoplasted root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
66.499.8GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
66.399.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
54.399.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
53.499.8GSM131429AtGen_6-8423_Woundingstress-Roots-6.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
40.999.8GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
40.099.8GSM184536Protoplasted root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.699.7GSM184533Protoplasted root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.499.7GSM131341AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
32.099.7GSM131345AtGen_6-4321_Droughtstress-Roots-3.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
31.399.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
29.999.7GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
29.099.7GSM131445AtGen_6-9121_Heatstress-Roots-0.5h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
28.799.7GSM131417AtGen_6-8124_Woundingstress-Roots-0.5h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
25.799.7GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
25.499.6GSM131469AtGen_6-9621_Heatstress(3h)+21hrecovery-Roots-24.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
25.199.6GSM131342AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
24.499.6GSM131229AtGen_6-0721_Control-Roots-0.25h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
24.399.6GSM131225AtGen_6-0021_Control-Roots-0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
24.399.6GSM131465AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
24.199.6GSM131349AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
23.199.6GSM131346AtGen_6-4322_Droughtstress-Roots-3.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
22.799.6GSM131366AtGen_6-5222_Genotoxicstress-Roots-1.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
22.399.6GSM131466AtGen_6-9522_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
22.199.6GSM131426AtGen_6-8325_Woundingstress-Roots-3.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
21.799.6GSM131446AtGen_6-9122_Heatstress-Roots-0.5h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
21.199.6GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
21.199.6GSM184489Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.099.6GSM184490Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.999.6GSM131378AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
20.699.6GSM131418AtGen_6-8126_Woundingstress-Roots-0.5h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
20.599.6GSM131425AtGen_6-8324_Woundingstress-Roots-3.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
19.999.6GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.799.6GSM131470AtGen_6-9622_Heatstress(3h)+21hrecovery-Roots-24.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
19.499.6GSM184538Whole roots 2hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.399.6GSM131386AtGen_6-7722_UV-Bstress-Roots-0.25h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
18.399.5GSM218589Protoplasted root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.199.5GSM131233AtGen_6-0121_Control-Roots-0.5h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
17.899.5GSM131414AtGen_6-8724_Woundingstress-Roots-0.25h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
17.699.5GSM131430AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
17.499.5GSM131257AtGen_6-0621_Control-Roots-24.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
17.399.5GSM131245AtGen_6-0821_Control-Roots-4.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
16.999.5GSM131358AtGen_6-4622_Droughtstress-Roots-24.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
16.899.5GSM131337AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
16.399.5GSM131246AtGen_6-0822_Control-Roots-4.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
16.299.5GSM131373AtGen_6-5421_Genotoxicstress-Roots-6.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
16.099.5GSM131422AtGen_6-8225_Woundingstress-Roots-1.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
15.999.5GSM131438AtGen_6-8622_Woundingstress-Roots-24.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
15.999.5GSM131241AtGen_6-0321_Control-Roots-3.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
15.899.5GSM131334AtGen_6-4722_Droughtstress-Roots-0.25h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
15.199.4GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.599.4GSM131365AtGen_6-5221_Genotoxicstress-Roots-1.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
14.399.4GSM131437AtGen_6-8621_Woundingstress-Roots-24.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
13.899.4GSM131370AtGen_6-5322_Genotoxicstress-Roots-3.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
13.599.4GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.299.4GSM218596Whole roots 3.5hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.999.3GSM131381AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
12.899.3GSM131405AtGen_6-7521_UV-Bstress-Roots-12.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
12.899.3GSM131249AtGen_6-0421_Control-Roots-6.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
12.499.3GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.299.3GSM131374AtGen_6-5422_Genotoxicstress-Roots-6.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
12.299.3GSM131413AtGen_6-8723_Woundingstress-Roots-0.25h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
12.199.3GSM131234AtGen_6-0122_Control-Roots-0.5h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
12.199.3GSM131361AtGen_6-5121_Genotoxicstress-Roots-0.5h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
12.099.3GSM131338AtGen_6-4122_Droughtstress-Roots-0.5h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
11.999.3GSM131289AtGen_6-2221_Osmoticstress-Roots-1.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
11.599.3ArrayExpressE-ATMX-33-raw-cel-1562596241---
11.599.3GSM131266AtGen_6-1222_Cold(4°C)-Roots-1.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.499.3GSM131269AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.499.3GSM131385AtGen_6-7721_UV-Bstress-Roots-0.25h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
11.299.2GSM184535Protoplasted root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.199.2GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
11.199.2GSM184485Epidermis&Cortex root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.099.2GSM128680Underwood_1-33_Mock-Inoculum-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.899.2GSM131262AtGen_6-1122_Cold(4°C)-Roots-0.5h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
10.699.2GSM131434AtGen_6-8525_Woundingstress-Roots-12.0h_Rep2GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
10.499.2GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
10.299.2GSM131401AtGen_6-7421_UV-Bstress-Roots-6.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
10.299.2GSM131242AtGen_6-0322_Control-Roots-3.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.199.2GSM131273AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
10.199.2GSM131254AtGen_6-0522_Control-Roots-12.0h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
10.099.2GSM131333AtGen_6-4721_Droughtstress-Roots-0.25h_Rep1GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO
9.999.1GSM131377AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)Link to GEO
9.999.1GSM184560Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.999.1GSM131461AtGen_6-9421_Heatstress(3h)+3hrecovery-Roots-6.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.899.1GSM131442AtGen_6-9722_Heatstress-Roots-0.25h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)Link to GEO
9.799.1GSM184507Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.699.1GSM184532Protoplasted root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.699.1GSM131421AtGen_6-8224_Woundingstress-Roots-1.0h_Rep1GSE5627AtGenExpress: Stress Treatments (Wounding stress)Link to GEO
9.699.1GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.599.1GSM131230AtGen_6-0722_Control-Roots-0.25h_Rep2GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
9.399.1GSM131285AtGen_6-2121_Osmoticstress-Roots-0.5h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)Link to GEO
9.199.1GSM131394AtGen_6-7222_UV-Bstress-Roots-1.0h_Rep2GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
9.099.1GSM184486Epidermis&Cortex root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.999.0GSM131310AtGen_6-3122_Saltstress-Roots-0.5h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
8.999.0GSM131389AtGen_6-7121_UV-Bstress-Roots-0.5h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)Link to GEO
8.799.0GSM131253AtGen_6-0521_Control-Roots-12.0h_Rep1GSE5620AtGenExpress: Stress Treatments (Control plants)Link to GEO
8.799.0GSM131350AtGen_6-4422_Droughtstress-Roots-6.0h_Rep2GSE5624AtGenExpress: Stress Treatments (Drought stress)Link to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage