Specifically-expressed experiments

Gene ID At3g11840
Gene name PUB24 (PLANT U-BOX 24)
Functional description Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
153.699.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
116.499.9GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
95.099.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
91.599.9GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
50.399.8ArrayExpressE-MEXP-807-raw-cel-1173272948---
48.199.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
47.199.8ArrayExpressE-NASC-76-raw-cel-1359879132---
46.299.8ArrayExpressE-MEXP-546-raw-cel-863289424---
44.299.8GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
42.699.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
40.099.8GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
39.799.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
38.599.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
38.199.8GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
37.399.7GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
35.599.7GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.499.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.499.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
34.899.7GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
34.699.7GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
33.299.7GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
33.299.7GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
32.299.7GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.699.7GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.699.7GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.599.7GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
31.399.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
30.999.7GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
30.799.7GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
29.099.7ArrayExpressE-MEXP-546-raw-cel-863289586---
26.099.7GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
25.999.7GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
24.999.6GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
24.299.6ArrayExpressE-MEXP-546-raw-cel-863289532---
23.599.6GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.599.6GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
22.499.6ArrayExpressE-MEXP-547-raw-cel-863346376---
22.499.6ArrayExpressE-MEXP-807-raw-cel-1173273252---
21.799.6GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.899.6ArrayExpressE-MEXP-546-raw-cel-863289476---
20.899.6ArrayExpressE-NASC-76-raw-cel-1359878951---
20.299.6GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
19.599.6GSM131313AtGen_6-3221_Saltstress-Roots-1.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
19.199.6GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
19.199.6GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
19.099.5GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
18.499.5GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.499.5GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
18.399.5ArrayExpressE-NASC-76-raw-cel-1359879106---
18.399.5GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
17.999.5GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.299.5GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
16.999.5GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.899.5GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
16.799.5ArrayExpressE-MEXP-546-raw-cel-863289404---
16.699.5ArrayExpressE-MEXP-547-raw-cel-863346403---
16.299.5GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
15.599.5ArrayExpressE-MEXP-546-raw-cel-863289450---
15.299.4GSM131314AtGen_6-3222_Saltstress-Roots-1.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
14.899.4GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
14.599.4ArrayExpressE-NASC-76-raw-cel-1359879028---
14.399.4GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
14.099.4GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
14.099.4GSM142642MC002_ATH1_A7.2-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.699.4GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
13.599.4GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.499.4GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
13.399.4GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.299.4GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.199.4GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.199.4GSM142646MC002_ATH1_A8.3-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
13.099.4GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.999.3GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
12.699.3GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.599.3GSM142845MG001_ATH1_A26-Torres-8N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.599.3GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.599.3GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
12.399.3GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.999.3GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.999.3GSM134403St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
11.799.3ArrayExpressE-MEXP-739-raw-cel-1099467276---
11.799.3GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
11.799.3GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.699.3GSM134441St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
11.499.3GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
11.499.3GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
11.499.3GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.399.3ArrayExpressE-MEXP-546-raw-cel-863289506---
11.299.2GSM25866A Treated - 1GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
11.199.2ArrayExpressE-MEXP-739-raw-cel-1099467240---
11.099.2GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
11.099.2GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
10.999.2GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
10.999.2ArrayExpressE-MEXP-807-raw-cel-1173273170---
10.899.2GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
10.699.2ArrayExpressE-MEXP-807-raw-cel-1173273116---
10.699.2GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.399.2GSM25867A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
10.399.2GSM134404St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
10.299.2GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
10.299.2GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
10.199.2GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
10.199.2GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
10.199.2GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.999.1GSM184559Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.899.1GSM142854MG001_ATH1_A7-Torres-3N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.899.1GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
9.699.1GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
9.699.1GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
9.699.1GSM131126AtGen_B-12_1-5-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.499.1GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
9.499.1GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.499.1GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.399.1GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infectionLink to GEO
9.399.1GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
9.199.1GSM275642flu_60minGSE10876Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastidsLink to GEO
9.199.1GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.199.1GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.099.1GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.099.1GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.099.1GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in ArabidopsisLink to GEO
9.099.1GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
8.999.0GSM184499Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0ArrayExpressE-MEXP-739-raw-cel-1099467249---
8.899.0GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
8.699.0ArrayExpressE-MEXP-739-raw-cel-1099467267---
8.699.0ArrayExpressE-MEXP-807-raw-cel-1173273144---



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