Specifically-expressed experiments

Gene ID	At3g11820
Gene name	SYP121 (SYNTAXIN OF PLANTS 121)
Functional description	Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
49.2	99.8	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
47.4	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
42.7	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
40.1	99.8	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
28.4	99.7	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
25.9	99.7	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
23.7	99.6	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
23.4	99.6	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
22.1	99.6	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
21.8	99.6	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
21.2	99.6	ArrayExpress	E-NASC-76-raw-cel-1359879132	-	-	-
20.7	99.6	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
20.4	99.6	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
19.6	99.6	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
19.3	99.6	ArrayExpress	E-NASC-76-raw-cel-1359879106	-	-	-
19.3	99.6	ArrayExpress	E-NASC-76-raw-cel-1359878951	-	-	-
18.6	99.5	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
18.6	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
18.1	99.5	GSM39206	Col_Chitin4	GSE2169	rre1 and rre2 mutants
18.1	99.5	GSM134405	St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
17.9	99.5	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
17.9	99.5	GSM131148	AtGen_B-34_3-6-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
17.5	99.5	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
16.2	99.5	GSM131132	AtGen_B-18_2-4-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
16.0	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467402	-	-	-
16.0	99.5	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
15.9	99.5	GSM131134	AtGen_B-20_2-6-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
15.7	99.5	ArrayExpress	E-MEXP-739-raw-cel-1099467470	-	-	-
15.6	99.5	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
15.2	99.4	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
15.1	99.4	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
14.8	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467419	-	-	-
14.5	99.4	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
14.5	99.4	ArrayExpress	E-MEXP-739-raw-cel-1099467487	-	-	-
14.4	99.4	GSM142851	MG001_ATH1_A4-Torres-2N1	GSE6176	Impact of Type III effectors on plant defense responses
14.2	99.4	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
13.7	99.4	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
13.7	99.4	ArrayExpress	E-NASC-76-raw-cel-1359879028	-	-	-
13.6	99.4	ArrayExpress	E-ATMX-28-raw-cel-1441104826	-	-	-
13.6	99.4	ArrayExpress	E-ATMX-28-raw-cel-1441104835	-	-	-
13.5	99.4	ArrayExpress	E-MEXP-546-raw-cel-863289506	-	-	-
13.5	99.4	GSM264764	paraquat 20mM 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
13.4	99.4	ArrayExpress	E-MEXP-546-raw-cel-863289404	-	-	-
13.2	99.4	GSM134423	St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
12.8	99.3	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
12.8	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467453	-	-	-
12.7	99.3	ArrayExpress	E-MEXP-547-raw-cel-863346403	-	-	-
12.5	99.3	GSM131146	AtGen_B-32_3-4-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
12.0	99.3	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
11.9	99.3	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
11.8	99.3	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
11.7	99.3	GSM134421	St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
11.6	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289450	-	-	-
11.5	99.3	ArrayExpress	E-MEXP-807-raw-cel-1173273088	-	-	-
11.5	99.3	GSM131118	AtGen_B-4_1-4-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.2	99.2	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
11.2	99.2	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.0	99.2	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
10.9	99.2	GSM134422	St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
10.9	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
10.9	99.2	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
10.8	99.2	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
10.7	99.2	ArrayExpress	E-MEXP-547-raw-cel-863346430	-	-	-
10.6	99.2	GSM142833	MG001_ATH1_A10-Torres-5N1	GSE6176	Impact of Type III effectors on plant defense responses
10.6	99.2	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
10.5	99.2	GSM142849	MG001_ATH1_A2-Torres-1N3	GSE6176	Impact of Type III effectors on plant defense responses
10.5	99.2	GSM134386	St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
10.4	99.2	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.3	99.2	GSM264761	Tween 0.1% 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.3	99.2	GSM264762	Tween 0.1% 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.3	99.2	GSM244453	Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.1	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467436	-	-	-
10.1	99.2	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
10.0	99.2	ArrayExpress	E-MEXP-547-raw-cel-863346457	-	-	-
10.0	99.2	GSM275642	flu_60min	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
9.9	99.1	ArrayExpress	E-MEXP-547-raw-cel-863346376	-	-	-
9.9	99.1	GSM134351	St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
9.9	99.1	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.8	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
9.7	99.1	GSM134385	St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.6	99.1	GSM131119	AtGen_B-5_1-5-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.5	99.1	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.5	99.1	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.4	99.1	GSM131120	AtGen_B-6_1-6-1_REP_1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.3	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
9.3	99.1	GSM128669	Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.3	99.1	GSM131133	AtGen_B-19_2-5-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.3	99.1	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.3	99.1	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
9.3	99.1	GSM142840	MG001_ATH1_A1-Torres-1N1	GSE6176	Impact of Type III effectors on plant defense responses
9.2	99.1	GSM142904	WW002_ATH1_A1-willa-CON-REP2	GSE6181	Assembly of the cell wall pectic matrix.
9.1	99.1	GSM142854	MG001_ATH1_A7-Torres-3N1	GSE6176	Impact of Type III effectors on plant defense responses
9.0	99.1	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
9.0	99.1	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
8.9	99.0	GSM128686	Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.8	99.0	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.8	99.0	GSM204069	protoplast_hypoxia_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
8.8	99.0	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
8.8	99.0	GSM128660	Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.7	99.0	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
8.7	99.0	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
8.7	99.0	GSM134396	St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
8.6	99.0	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0

Back to the CoP portal site

Back to the KAGIANA project homepage