Specifically-expressed experiments

Gene ID At3g11520
Gene name CYCB1
Functional description Encodes a B-type mitotic cyclin.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
97.399.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
96.299.9GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
81.599.9GSM133950Murray_2-6_T10-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
67.699.9GSM133951Murray_2-7_T12-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
54.999.8GSM142906WW002_ATH1_A2-willa-ISOX-REP2GSE6181Assembly of the cell wall pectic matrix.Link to GEO
51.999.8GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
50.799.8GSM142905WW002_ATH1_A1-willa-CON-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
48.499.8GSM142907WW002_ATH1_A2-willa-ISOX-REP3GSE6181Assembly of the cell wall pectic matrix.Link to GEO
41.599.8GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
40.799.8GSM133952Murray_2-8_T14-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
37.299.7ArrayExpressE-MEXP-1797-raw-cel-1669767958---
35.799.7GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
35.499.7GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
34.999.7GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
33.299.7GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
33.099.7GSM10479lec1-1 Cotyledon Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
32.099.7GSM134202Murray_3-1_D1-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
30.099.7GSM10445WT 24-Hr Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
27.599.7GSM265418Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
26.399.7GSM10441WT Ovule 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
26.199.7ArrayExpressE-MEXP-1797-raw-cel-1669768048---
25.799.7GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
24.499.6GSM252688Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
22.999.6ArrayExpressE-MEXP-1797-raw-cel-1669767976---
22.299.6GSM252664Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
22.199.6GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
21.299.6GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
21.199.6GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
20.999.6GSM265419Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
20.399.6GSM265427Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
20.099.6GSM252666Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
19.599.6GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
19.199.6GSM10448WT Cotyledon Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
19.099.5GSM10480lec1-1 Cotyledon Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
18.899.5GSM252686Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
18.599.5GSM265426Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
18.199.5GSM252689Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
18.099.5GSM10478lec1-1 24-Hr Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutantsLink to GEO
17.299.5GSM133953Murray_2-9_T16-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
17.099.5ArrayExpressE-ATMX-35-raw-cel-1574334832---
16.599.5GSM133974Birnbaum_1-4_StageI-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
16.299.5GSM133976Birnbaum_1-6_StageI-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
15.999.5ArrayExpressE-ATMX-31-raw-cel-1516947899---
15.999.5GSM252665Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
15.799.5GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
15.699.5ArrayExpressE-MEXP-1797-raw-cel-1669768057---
15.399.4GSM252685Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
15.299.4GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
14.499.4GSM252684Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
14.399.4ArrayExpressE-MEXP-1360-raw-cel-1561600622---
12.899.3GSM131105Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)Link to GEO
12.599.3GSM226532L2SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.299.3GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
11.799.3GSM133975Birnbaum_1-5_StageI-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
10.999.2GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
10.899.2GSM131661ATGE_29_A2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
10.899.2GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
10.499.2GSM10449WT Cotyledon Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life CycleLink to GEO
10.199.2ArrayExpressE-MEXP-1797-raw-cel-1669767949---
10.099.2GSM131662ATGE_29_B2GSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.999.1GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.999.1GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.999.1GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.899.1GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.799.1GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
9.799.1GSM133770Lindsey_1-22_torpedo-apical_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
9.799.1GSM131675ATGE_49_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.699.1GSM131654ATGE_8_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.699.1GSM133949Murray_2-5_T8-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
9.699.1ArrayExpressE-MEXP-1797-raw-cel-1669767994---
9.599.1ArrayExpressE-MEXP-1797-raw-cel-1669767985---
9.499.1GSM226544Slice2JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
9.499.1ArrayExpressE-ATMX-31-raw-cel-1516947882---
9.499.1GSM131106Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)Link to GEO
9.399.1GSM131653ATGE_8_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.299.1GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.299.1GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in ArabidopsisLink to GEO
9.199.1GSM176879AWP_Control_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
9.199.1GSM131664ATGE_46_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.199.1GSM252676Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.199.1GSM131677ATGE_50_BGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.199.1GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.199.1GSM252683Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep5GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.099.1GSM252682Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
8.999.0GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.899.0ArrayExpressE-ATMX-35-raw-cel-1574334800---
8.899.0GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
8.799.0GSM131676ATGE_50_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
8.799.0GSM184831Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
8.699.0GSM131652ATGE_8_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO



Back to the CoP portal site

Back to the KAGIANA project homepage