| Gene ID | At3g10800 |
| Gene name | BZIP28 |
| Functional description | Encodes bZIP28, a putative membrane-tethered transcriptional factor. Up-regulated in response to heat; a bZIP28 null mutant has a heat-sensitive phenotype. bZIP28 has a similar domain structure to the mammalian ATF6 protein involved in the unfolded protein response (UPR), and shares a bZIP domain, transmembrane domain, and a canonical S1P cleavage site. The bZIP28 seems to be glycosylated in vivo. bZIP28 does not appear to be transcriptionally up-regulated by UPR-inducing tunicamycin (TM) treatment. But, the expression level of three UPR-related genes is reduced in TM-treated zip28 mutants relative to wild type seedlings. And several UPR genes are transcriptionally upregulated when an N-terminal portion of the bZIP28 protein is expressed using the 35S promoter. A myc:bZIP28 fusion protein appears to be cleaved, likely at a canonical S2 cleavage site, following a TM treatment or a DTT stress-inducing treatment, but not a salt treatment. A portion of the mGFP:bZIP28 protein present in root cells appears to translocate from the cytoplasm and ER to the nucleus following TM treatment. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 24.6 | 99.6 | ArrayExpress | E-MEXP-1443-raw-cel-1581869745 | - | - | - |
| 23.1 | 99.6 | ArrayExpress | E-MEXP-1725-raw-cel-1669614634 | - | - | - |
| 22.9 | 99.6 | GSM131454 | AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 | GSE5628 | AtGenExpress: Stress Treatments (Heat stress) | |
| 22.5 | 99.6 | GSM131453 | AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 | GSE5628 | AtGenExpress: Stress Treatments (Heat stress) | |
| 22.3 | 99.6 | ArrayExpress | E-MEXP-1443-raw-cel-1581869803 | - | - | - |
| 16.4 | 99.5 | GSM142904 | WW002_ATH1_A1-willa-CON-REP2 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 16.0 | 99.5 | GSM204069 | protoplast_hypoxia_rep1 | GSE8248 | Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells | |
| 16.0 | 99.5 | ArrayExpress | E-MEXP-1797-raw-cel-1669768084 | - | - | - |
| 15.0 | 99.4 | ArrayExpress | E-MEXP-1443-raw-cel-1581869863 | - | - | - |
| 14.9 | 99.4 | GSM134208 | Murray_3-4_D7-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 14.6 | 99.4 | ArrayExpress | E-ATMX-35-raw-cel-1574334832 | - | - | - |
| 14.6 | 99.4 | ArrayExpress | E-MEXP-1797-raw-cel-1669767985 | - | - | - |
| 13.9 | 99.4 | GSM142902 | WW001_ATH1_A1-WILLA-CON | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 13.7 | 99.4 | GSM128662 | Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 | GSE5520 | Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction | |
| 12.9 | 99.3 | ArrayExpress | E-MEXP-1797-raw-cel-1669768066 | - | - | - |
| 12.8 | 99.3 | GSM142879 | GW001_ATH1_A24-Warre-03f | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 12.5 | 99.3 | GSM142878 | GW001_ATH1_A23-Warre-03f | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 12.3 | 99.3 | ArrayExpress | E-ATMX-35-raw-cel-1574334800 | - | - | - |
| 11.7 | 99.3 | GSM142623 | MC002_ATH1_A1.1-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 11.5 | 99.3 | ArrayExpress | E-ATMX-35-raw-cel-1574334816 | - | - | - |
| 11.4 | 99.3 | GSM133973 | Birnbaum_1-3_src5-3_Rep3_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 11.3 | 99.3 | GSM142642 | MC002_ATH1_A7.2-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 10.6 | 99.2 | GSM142649 | MC002_ATH1_A9.3-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 10.5 | 99.2 | ArrayExpress | E-MEXP-1797-raw-cel-1669768048 | - | - | - |
| 10.4 | 99.2 | GSM142624 | MC002_ATH1_A1.2-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.9 | 99.1 | ArrayExpress | E-MEXP-1797-raw-cel-1669767958 | - | - | - |
| 9.9 | 99.1 | GSM142643 | MC002_ATH1_A7.3-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.9 | 99.1 | GSM184912 | Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3 | GSE7641 | Expression analysis of root cell-types after treatment with salt | |
| 9.4 | 99.1 | ArrayExpress | E-MEXP-1797-raw-cel-1669768057 | - | - | - |
| 9.4 | 99.1 | GSM184516 | Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 9.4 | 99.1 | GSM133304 | RIKEN-NAKABAYASHI1B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 9.2 | 99.1 | GSM131450 | AtGen_6-9222_Heatstress-Roots-1.0h_Rep2 | GSE5628 | AtGenExpress: Stress Treatments (Heat stress) | |
| 8.9 | 99.0 | ArrayExpress | E-MEXP-1797-raw-cel-1669768039 | - | - | - |
| 8.9 | 99.0 | GSM184520 | Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 8.8 | 99.0 | GSM142641 | MC002_ATH1_A7.1-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 8.8 | 99.0 | GSM142629 | MC002_ATH1_A3.1-dubos-6kx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 8.8 | 99.0 | GSM134206 | Murray_3-3_D5-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 8.7 | 99.0 | GSM142625 | MC002_ATH1_A1.3-dubos-wtx | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 8.7 | 99.0 | GSM142647 | MC002_ATH1_A9.1-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 8.6 | 99.0 | GSM142648 | MC002_ATH1_A9.2-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 8.6 | 99.0 | GSM131449 | AtGen_6-9221_Heatstress-Roots-1.0h_Rep1 | GSE5628 | AtGenExpress: Stress Treatments (Heat stress) | |
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