Specifically-expressed experiments

Gene ID	At3g05890
Gene name	RCI2B (RARE-COLD-INDUCIBLE 2B)
Functional description	F:unknown;P:response to cold;C:integral to membrane;BFPMO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
73.7	99.9	GSM226536	L6SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
43.5	99.8	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
41.5	99.8	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
40.8	99.8	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
39.7	99.8	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
38.3	99.8	GSM226539	L9SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
36.6	99.7	GSM226538	L8SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
26.2	99.7	GSM226549	Slice7JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
23.4	99.6	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
22.4	99.6	GSM184481	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.9	99.6	GSM133984	Birnbaum_1-14_StageIII-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
19.9	99.6	GSM133985	Birnbaum_1-15_StageIII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
19.8	99.6	GSM226537	L7SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
18.7	99.5	GSM184484	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.5	99.5	GSM226548	Slice6JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.7	99.5	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.5	99.5	GSM226547	Slice5JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
17.1	99.5	GSM184532	Protoplasted root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.0	99.5	GSM184905	Arabidopsis, root cells, protophloem, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
16.9	99.5	GSM226553	Slice11JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
16.8	99.5	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.7	99.5	GSM265414	Arabidopsis, root cells, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
16.2	99.5	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
15.3	99.4	GSM184507	Pericycle root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
15.2	99.4	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.5	99.4	GSM226541	L11SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.2	99.4	GSM226540	L10SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.1	99.4	GSM184504	Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.0	99.4	GSM134513	Col-0_4day_dark_-lincomycin_rep1	GSE5759	red illumination w/o lincomycin
13.4	99.4	GSM184478	Lateral Root Cap root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.0	99.4	GSM184835	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5	GSE7639	Expression analysis of root developmental zones after treatment with salt
12.2	99.3	GSM218585	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.2	99.3	GSM226552	Slice10JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.0	99.3	GSM131212	AtGen_D-46_3-AS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
12.0	99.3	GSM184531	Protoplasted root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.0	99.2	GSM131181	AtGen_D-13_1-BS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
10.9	99.2	GSM184487	Epidermis&Cortex root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.9	99.2	ArrayExpress	E-MEXP-1784-raw-cel-1661573074	-	-	-
10.9	99.2	GSM184526	Stele root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.9	99.2	GSM184494	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.7	99.2	GSM311296	Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
10.5	99.2	GSM131214	AtGen_D-48_3-WS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
10.4	99.2	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
10.4	99.2	GSM184906	Arabidopsis, root cells, protophloem, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.3	99.2	GSM184510	Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.2	99.2	GSM133131	S1500_0H_A	GSE5688	AtGenExpress: Response to sulfate limitation
10.2	99.2	GSM131211	AtGen_D-45_3-BS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
10.1	99.2	GSM184536	Protoplasted root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.0	99.2	GSM133987	Birnbaum_1-17_wol-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
10.0	99.2	GSM131202	AtGen_D-36_3-RL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.9	99.1	GSM226550	Slice8JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.9	99.1	GSM133127	S0_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.8	99.1	GSM184476	Lateral Root Cap root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.8	99.1	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	GSM131208	AtGen_D-42_3-FS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.8	99.1	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.7	99.1	GSM218590	Protoplasted root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.7	99.1	GSM184522	Stele root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.7	99.1	GSM133139	S1500_4H_A	GSE5688	AtGenExpress: Response to sulfate limitation
9.7	99.1	GSM131195	AtGen_D-29_2-BS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.6	99.1	GSM184486	Epidermis&Cortex root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.6	99.1	GSM131177	AtGen_D-9_1-DS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.6	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
9.6	99.1	GSM133989	Birnbaum_1-22_gl2-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.6	99.1	GSM133988	Birnbaum_1-18_wol-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.5	99.1	GSM131197	AtGen_D-31_2-US_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.5	99.1	GSM292077	Wt, dark sample, biological rep2	GSE11594	Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
9.4	99.1	GSM131204	AtGen_D-38_3-AL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.4	99.1	GSM131210	AtGen_D-44_3-RS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.3	99.1	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM131174	AtGen_D-6_1-AL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.2	99.1	GSM134519	Col-0_4day_red illumination_+lincomycin_rep1	GSE5759	red illumination w/o lincomycin
9.2	99.1	GSM184836	Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.1	99.1	GSM131169	AtGen_D-1_1-DL_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.1	99.1	GSM311280	Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
9.1	99.1	GSM133983	Birnbaum_1-13_StageIII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.0	99.1	GSM218588	Protoplasted root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.0	99.1	GSM260881	Yap_A2-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
9.0	99.1	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
9.0	99.1	GSM184552	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.0	99.1	GSM133968	Birnbaum_1-19_LRC-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
8.9	99.0	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM184511	Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM131184	AtGen_D-16_1-WS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM184844	Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.9	99.0	GSM131180	AtGen_D-12_1-RS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM133125	S0_2H_A	GSE5688	AtGenExpress: Response to sulfate limitation
8.8	99.0	GSM260880	Yap_A1-AMF	GSE10323	Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways
8.8	99.0	ArrayExpress	E-ATMX-33-raw-cel-1562596197	-	-	-
8.8	99.0	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
8.7	99.0	GSM184482	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.7	99.0	GSM131205	AtGen_D-39_3-UL_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	GSM131191	AtGen_D-24_2-WL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.7	99.0	GSM133134	S1500_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation
8.7	99.0	GSM131192	AtGen_D-25_2-DS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments

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