Specifically-expressed experiments

Gene ID	At3g05630
Gene name	PLDP2
Functional description	Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
286.0	100.0	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
153.2	99.9	GSM142904	WW002_ATH1_A1-willa-CON-REP2	GSE6181	Assembly of the cell wall pectic matrix.
123.3	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669768057	-	-	-
119.7	99.9	ArrayExpress	E-ATMX-31-raw-cel-1516947916	-	-	-
114.0	99.9	GSM142902	WW001_ATH1_A1-WILLA-CON	GSE6181	Assembly of the cell wall pectic matrix.
111.9	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669768030	-	-	-
98.4	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767940	-	-	-
97.9	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669768039	-	-	-
89.0	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767976	-	-	-
87.0	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767949	-	-	-
86.6	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767967	-	-	-
85.5	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669768066	-	-	-
78.1	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669768048	-	-	-
76.3	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767958	-	-	-
76.2	99.9	ArrayExpress	E-ATMX-31-raw-cel-1516947899	-	-	-
74.9	99.9	ArrayExpress	E-ATMX-31-raw-cel-1516947882	-	-	-
72.3	99.9	ArrayExpress	E-MEXP-1797-raw-cel-1669767985	-	-	-
64.5	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669768075	-	-	-
61.9	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
60.5	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
58.2	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
58.0	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669768012	-	-	-
57.9	99.8	ArrayExpress	E-ATMX-30-raw-cel-1513696906	-	-	-
57.5	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
57.4	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.0	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
53.9	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669767994	-	-	-
52.9	99.8	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
52.7	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937569	-	-	-
52.3	99.8	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
52.2	99.8	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
51.4	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
50.7	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
50.5	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669768084	-	-	-
50.0	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.5	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.9	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.7	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669768021	-	-	-
48.4	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
46.9	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937533	-	-	-
46.4	99.8	ArrayExpress	E-MEXP-791-raw-cel-1122937515	-	-	-
45.7	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
45.6	99.8	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
45.5	99.8	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
44.8	99.8	ArrayExpress	E-MEXP-1797-raw-cel-1669768003	-	-	-
43.7	99.8	GSM131065	Hammond_2-6_pho1mutant_Rep3_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
37.0	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937479	-	-	-
35.2	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937497	-	-	-
29.8	99.7	ArrayExpress	E-MEXP-791-raw-cel-1122937551	-	-	-
28.9	99.7	GSM152143	siz1-3 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
26.0	99.7	GSM184477	Lateral Root Cap root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.9	99.6	GSM270865	Arabidopsis cell culture, 4 h_control_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
23.7	99.6	GSM133866	Cain_1-1_WT1_Rep1_ATH1	GSE5740	Polycomb Binding Protein
23.6	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
23.3	99.6	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
23.1	99.6	GSM39208	RRE2_C2	GSE2169	rre1 and rre2 mutants
23.1	99.6	GSM131063	Hammond_2-4_pho1mutant_Rep2_ATH1	GSE5611	Differential gene expression patterns in the phosphate deficient mutant, pho 1
20.5	99.6	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
20.5	99.6	GSM270853	Arabidopsis cell culture, 4 h_control_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
20.4	99.6	GSM270866	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
20.2	99.6	GSM39200	Col_C2	GSE2169	rre1 and rre2 mutants
19.8	99.6	GSM269827	C2 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
19.8	99.6	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
19.2	99.6	GSM39206	Col_Chitin4	GSE2169	rre1 and rre2 mutants
19.1	99.6	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
18.7	99.5	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
18.7	99.5	GSM39201	Col_C3	GSE2169	rre1 and rre2 mutants
18.1	99.5	GSM134206	Murray_3-3_D5-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
17.7	99.5	GSM131539	ATGE_25_C	GSE5630	AtGenExpress: Developmental series (leaves)
17.7	99.5	GSM133868	Cain_1-2_WT1_Rep2_ATH1	GSE5740	Polycomb Binding Protein
17.6	99.5	GSM133869	Cain_1-4_CDB1-Knockout_Rep2_ATH1	GSE5740	Polycomb Binding Protein
17.5	99.5	GSM39203	Col_Chitin1	GSE2169	rre1 and rre2 mutants
17.2	99.5	GSM131537	ATGE_25_A	GSE5630	AtGenExpress: Developmental series (leaves)
16.8	99.5	GSM39214	RRE2_Chitin4	GSE2169	rre1 and rre2 mutants
15.9	99.5	ArrayExpress	E-MEXP-557-raw-cel-879731601	-	-	-
15.9	99.5	GSM39192	RRE1_C2	GSE2169	rre1 and rre2 mutants
15.5	99.5	GSM134208	Murray_3-4_D7-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
15.3	99.4	GSM270814	Arabidopsis cell culture, 4 h_control_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
15.1	99.4	GSM39209	RRE2_C3	GSE2169	rre1 and rre2 mutants
14.7	99.4	GSM39210	RRE2_C4	GSE2169	rre1 and rre2 mutants
14.5	99.4	GSM131538	ATGE_25_B	GSE5630	AtGenExpress: Developmental series (leaves)
13.8	99.4	GSM39199	Col_C1	GSE2169	rre1 and rre2 mutants
13.6	99.4	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
13.4	99.4	GSM39211	RRE2_Chitin1	GSE2169	rre1 and rre2 mutants
13.4	99.4	GSM39213	RRE2_Chitin3	GSE2169	rre1 and rre2 mutants
12.9	99.3	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
12.8	99.3	GSM39198	RRE1_Chitin4	GSE2169	rre1 and rre2 mutants
11.9	99.3	GSM39205	Col_Chitin3	GSE2169	rre1 and rre2 mutants
11.9	99.3	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
11.7	99.3	GSM39193	RRE1_C3	GSE2169	rre1 and rre2 mutants
11.7	99.3	GSM39202	Col_C4	GSE2169	rre1 and rre2 mutants
11.6	99.3	GSM133867	Cain_1-3_CDB1-Knockout_Rep1_ATH1	GSE5740	Polycomb Binding Protein
11.4	99.3	GSM39195	RRE1_Chitin1	GSE2169	rre1 and rre2 mutants
11.1	99.2	GSM269833	T8 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.6	99.2	GSM39194	RRE1_C4	GSE2169	rre1 and rre2 mutants
10.6	99.2	GSM39191	RRE1_C1	GSE2169	rre1 and rre2 mutants
10.0	99.2	GSM184483	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.9	99.1	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
9.8	99.1	GSM270870	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
9.6	99.1	GSM268249	dor-drought-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
9.6	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982521	-	-	-
9.4	99.1	GSM184480	Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.1	99.1	ArrayExpress	E-MEXP-475-raw-cel-680982503	-	-	-
9.1	99.1	GSM39207	RRE2_C1	GSE2169	rre1 and rre2 mutants
9.0	99.1	GSM268247	WT-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
8.8	99.0	GSM269815	T6 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress

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