| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 12.3 | 99.3 | GSM133762 | Lindsey_1-14_torpedo-root_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues |  |
| 9.1 | 99.1 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 7.4 | 98.8 | GSM133979 | Birnbaum_1-9_StageII-2_Rep2_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 7.2 | 98.8 | GSM142904 | WW002_ATH1_A1-willa-CON-REP2 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 6.4 | 98.6 | GSM133947 | Murray_2-3_T4-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 6.2 | 98.6 | GSM265428 | Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 6.0 | 98.5 | GSM142902 | WW001_ATH1_A1-WILLA-CON | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 6.0 | 98.5 | GSM143309 | Tsu_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 5.9 | 98.5 | GSM266665 | Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4 | GSE10501 | Expression analysis of root cell-types after iron deficiency (-Fe) treatment | |
| 5.9 | 98.5 | GSM176876 | AWP_AL_Txed_1 | GSE7334 | Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress | |
| 5.9 | 98.5 | GSM184895 | Arabidopsis, root cells, cortex, standard conditions, replicate 1 | GSE7641 | Expression analysis of root cell-types after treatment with salt | |
| 5.8 | 98.4 | GSM133256 | RIKEN-GODA12B-6 | GSE5696 | AtGenExpress: Effect of brassinosteroids in seedlings | |
| 5.7 | 98.4 | GSM265420 | Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 5.7 | 98.4 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 5.6 | 98.4 | GSM216904 | ga1-3_shoots_1h_GA4_repl3 | GSE8739 | Early gibberellin responses in Arabidopsis | |
| 5.4 | 98.3 | GSM133258 | RIKEN-GODA13B-6 | GSE5696 | AtGenExpress: Effect of brassinosteroids in seedlings | |
| 5.4 | 98.3 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 5.4 | 98.3 | ArrayExpress | E-MEXP-1474-raw-cel-1593932673 | - | - | - |
| 5.4 | 98.3 | GSM157307 | Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1 | GSE6824 | Identification of genes involved in nutritional regulation of root architecture | |
| 5.2 | 98.2 | GSM242960 | Steroid day 3 (day3D2) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
