Specifically-expressed experiments

Gene ID At3g05060
Gene name SAR DNA-binding protein, putative
Functional description SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.099.8GSM133976Birnbaum_1-6_StageI-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
28.299.7GSM252684Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
27.399.7GSM252688Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
25.499.6GSM252685Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
22.999.6GSM184840Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
22.499.6GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
22.499.6ArrayExpressE-MEXP-849-raw-cel-1181981046---
22.099.6GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
21.999.6GSM133977Birnbaum_1-7_StageI-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
21.799.6GSM252686Arabidopsis Root from tip to 130 mm proximal to tip (cut 8dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
20.199.6GSM133975Birnbaum_1-5_StageI-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
19.099.5GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
18.599.5GSM184832Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
17.999.5GSM265426Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
17.399.5GSM226532L2SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
17.199.5GSM311273Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
16.799.5GSM265418Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
16.699.5GSM252689Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
16.599.5GSM265419Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
16.099.5GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
15.899.5GSM284385Arabidopsis GEP6GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
15.599.5ArrayExpressE-MEXP-849-raw-cel-1181981006---
14.799.4GSM184839Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
14.799.4ArrayExpressE-MEXP-849-raw-cel-1181981038---
14.399.4GSM265427Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
14.299.4GSM252687Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (8 dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
14.199.4GSM184831Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
13.799.4GSM133974Birnbaum_1-4_StageI-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
13.599.4ArrayExpressE-MEXP-849-raw-cel-1181981030---
13.599.4ArrayExpressE-MEXP-849-raw-cel-1181981022---
13.499.4GSM226544Slice2JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
13.199.4GSM133321RIKEN-LI6AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
12.699.3ArrayExpressE-MEXP-849-raw-cel-1181981014---
12.699.3ArrayExpressE-MEXP-1592-raw-cel-1617526920---
12.599.3ArrayExpressE-MEXP-849-raw-cel-1181980998---
11.899.3GSM134202Murray_3-1_D1-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cellsLink to GEO
11.799.3ArrayExpressE-MEXP-1799-raw-cel-1665601146---
11.699.3GSM133770Lindsey_1-22_torpedo-apical_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
11.699.3GSM252663Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
11.699.3ArrayExpressE-MEXP-1799-raw-cel-1665601214---
11.599.3ArrayExpressE-MEXP-1592-raw-cel-1617526888---
11.499.3ArrayExpressE-MEXP-1592-raw-cel-1617526824---
10.899.2ArrayExpressE-MEXP-728-raw-cel-1062073338---
10.699.2GSM252664Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
10.599.2GSM184901Arabidopsis, root cells, stele, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.499.2ArrayExpressE-MEXP-1799-raw-cel-1665601196---
10.399.2GSM252678Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
10.299.2GSM252673Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.999.1ArrayExpressE-MEXP-849-raw-cel-1181980982---
9.899.1GSM173623Col-0 rep2GSE7227microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seedsLink to GEO
9.799.1GSM252670Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.699.1ArrayExpressE-MEXP-1592-raw-cel-1617526816---
9.699.1GSM133319RIKEN-LI5AGSE5701AtGenExpress: Basic hormone treatment of seedsLink to GEO
9.599.1ArrayExpressE-MEXP-1799-raw-cel-1665601185---
9.499.1ArrayExpressE-MEXP-1592-raw-cel-1617526952---
9.499.1GSM252674Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
9.399.1GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)Link to GEO
9.299.1ArrayExpressE-MEXP-1344-raw-cel-1559561653---
9.099.1GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.999.0GSM184902Arabidopsis, root cells, stele, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.899.0GSM252682Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
8.899.0GSM133952Murray_2-8_T14-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studiesLink to GEO
8.799.0GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.799.0GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.699.0ArrayExpressE-MEXP-849-raw-cel-1181980990---
8.699.0ArrayExpressE-MEXP-1799-raw-cel-1665601115---
8.699.0ArrayExpressE-MEXP-728-raw-cel-1062073467---



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