| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 44.9 | 99.8 | GSM133960 | Fukuda_1-5_4A_Rep1_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. |  |
| 38.8 | 99.8 | GSM133966 | Fukuda_1-11_10A_Rep1_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 38.5 | 99.8 | GSM133961 | Fukuda_1-6_4B_Rep2_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 37.5 | 99.7 | GSM133958 | Fukuda_1-3_2A_Rep1_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 34.2 | 99.7 | GSM133959 | Fukuda_1-4_2B_Rep2_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 33.0 | 99.7 | GSM133964 | Fukuda_1-9_8A_Rep1_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 30.8 | 99.7 | GSM133967 | Fukuda_1-12_10B_Rep2_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 26.6 | 99.7 | GSM133965 | Fukuda_1-10_8B_Rep2_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 26.4 | 99.7 | GSM133963 | Fukuda_1-8_6B_Rep2_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 24.0 | 99.6 | GSM133962 | Fukuda_1-7_6A_Rep1_ATH1 | GSE5748 | In vitro tracheary element transdifferentiation of Col-0 suspension cells. | |
| 20.8 | 99.6 | GSM291119 | root - 21% oxygen - 48h - A | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 20.6 | 99.6 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 20.6 | 99.6 | GSM290758 | root - 01% oxygen - 48h - A | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 19.3 | 99.6 | GSM291024 | root - 08% oxygen - 48h - A | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 16.6 | 99.5 | GSM131670 | ATGE_48_A | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 16.3 | 99.5 | GSM131672 | ATGE_48_C | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 16.0 | 99.5 | GSM131671 | ATGE_48_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 12.5 | 99.3 | GSM242959 | Steroid day 3 (day3D1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 12.1 | 99.3 | GSM133721 | Deeken_A-1-Deeke-Tum_SLD_REP2 | GSE5725 | Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana | |
| 11.7 | 99.3 | GSM75509 | Col-0 2h NAA replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 10.9 | 99.2 | GSM75513 | Col-0 2h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 10.8 | 99.2 | GSM242961 | Mock day 7 (day7E1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 10.6 | 99.2 | GSM142639 | MC002_ATH1_A6.2-dubos-5kc | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 10.4 | 99.2 | GSM142643 | MC002_ATH1_A7.3-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 10.1 | 99.2 | GSM242958 | Mock day 3 (day3E2) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 10.1 | 99.2 | GSM242957 | Mock day 3 (day3E1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 9.7 | 99.1 | GSM242962 | Mock day 7 (day7E2) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 9.7 | 99.1 | GSM242954 | Mock day 1 (day1E2) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 9.5 | 99.1 | GSM75521 | slr-1 6h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 9.5 | 99.1 | GSM242955 | Steroid day 1 (day1D1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 9.5 | 99.1 | GSM142642 | MC002_ATH1_A7.2-dubos-wLh | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
| 9.4 | 99.1 | GSM75512 | Col-0 0h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 9.4 | 99.1 | GSM133719 | Deeken_A-1-Deeke-Tum_SLD_REP1 | GSE5725 | Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana | |
| 9.3 | 99.1 | GSM242964 | Steroid day 7 (day7D2) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
| 9.1 | 99.1 | GSM157332 | Coates_1-4_ara1/2mut_Rep1_ATH1 | GSE6826 | Identification of candidate Arabidillo target genes in Arabidopsis | |
| 8.8 | 99.0 | GSM242963 | Steroid day 7 (day7D1) | GSE9605 | Target genes of AGAMOUS during early flower development in Arabidopsis | |
